G1708286


Basic Information

Item Value
gene id G1708286
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12504035 ~ 12510265 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1956782
GGAGGCTTCAGCTGGACCTGTGAGAACAAAAGGTATATTCATTTAAGATGGTTGAacggtcctctaatacaggactagtaaaggtatgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtatgttaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaagtctgttaatacaggactagtaatacatgactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtatgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagcaaaggcctgttaatacaggactagtaaaggcctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactaggaagggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaatacatgactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtatgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagcaaaggcctgttaatacaggactagtaaaggcctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactaggaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaaaggtatgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactaataaaagtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactaataaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactaataaaggtctgttaatacaggactagtaaaggcctgttaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaatacaggaatagtaaaggtctgttaataaaggactagtaaaggtctgttaattcaggactagtaaaggtc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106569954

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1956782 True 1680 lncRNA 0.36 3 12504035 12510265

Neighbor

gene id symbol gene type direction distance location
LOC110490703 LOC106594938 coding upstream 55727 12421633 ~ 12448308 (+)
LOC118942882 LOC106609674 coding upstream 82769 12391629 ~ 12421266 (+)
LOC110490810 LOC106576597 coding downstream 234735 12745000 ~ 12825754 (+)
LOC110516535 LOC106576596 coding downstream 318904 12829169 ~ 12837237 (+)
LOC118943029 NA coding downstream 332117 12771599 ~ 12842545 (+)
LOC118942883 LOC106596479 coding downstream 333838 12844103 ~ 12860368 (+)
cmas cmas coding downstream 357223 12867488 ~ 12885849 (+)
G1708282 NA non-coding upstream 6027 12497695 ~ 12498008 (+)
G1708281 NA non-coding upstream 6664 12497016 ~ 12497371 (+)
G1708279 NA non-coding upstream 7815 12495982 ~ 12496220 (+)
G1708276 NA non-coding upstream 9374 12494347 ~ 12494661 (+)
G1708271 NA non-coding upstream 16009 12487679 ~ 12488026 (+)
G1708285 NA non-coding downstream 435 12510700 ~ 12514626 (+)
G1708295 NA non-coding downstream 11146 12521411 ~ 12521763 (+)
G1708301 NA non-coding downstream 15320 12525585 ~ 12526040 (+)
G1708304 NA non-coding downstream 33846 12544111 ~ 12544347 (+)
G1708308 NA non-coding downstream 39431 12549696 ~ 12549954 (+)
G1708014 NA other upstream 253911 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 639462 11863662 ~ 11864573 (+)
G1707462 NA other upstream 849412 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 935079 11568429 ~ 11568956 (+)
G1706711 NA other upstream 1104747 11398040 ~ 11399288 (+)
G1708323 NA other downstream 68343 12578608 ~ 12584156 (+)
G1708367 NA other downstream 139421 12649686 ~ 12651577 (+)
G1708495 NA other downstream 273942 12784207 ~ 12785502 (+)
G1708635 NA other downstream 441420 12951685 ~ 12952515 (+)

Expression


Co-expression Network