G1708285


Basic Information

Item Value
gene id G1708285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12510700 ~ 12514626 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1956780
gactagtaaaggtctgttaacacaggactagtaatacaggactagtaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaaaggtatgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggcctgttaatacaggactattaatacaggactagtaaagatctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttagtacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacagtactagtaaaggcctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaaaggtatgttattacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaagatgTGTGTTACAGACGTCGATAC

Function

NR:

description
uncharacterized protein KIAA0754-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1956780 True 621 lncRNA 0.36 2 12510700 12514626

Neighbor

gene id symbol gene type direction distance location
LOC110490703 LOC106594938 coding upstream 62392 12421633 ~ 12448308 (+)
LOC118942882 LOC106609674 coding upstream 89434 12391629 ~ 12421266 (+)
LOC110490810 LOC106576597 coding downstream 230374 12745000 ~ 12825754 (+)
LOC110516535 LOC106576596 coding downstream 314543 12829169 ~ 12837237 (+)
LOC118943029 NA coding downstream 327756 12771599 ~ 12842545 (+)
LOC118942883 LOC106596479 coding downstream 329477 12844103 ~ 12860368 (+)
cmas cmas coding downstream 352862 12867488 ~ 12885849 (+)
G1708286 NA non-coding upstream 435 12504035 ~ 12510265 (+)
G1708282 NA non-coding upstream 12692 12497695 ~ 12498008 (+)
G1708281 NA non-coding upstream 13329 12497016 ~ 12497371 (+)
G1708279 NA non-coding upstream 14480 12495982 ~ 12496220 (+)
G1708276 NA non-coding upstream 16039 12494347 ~ 12494661 (+)
G1708295 NA non-coding downstream 6785 12521411 ~ 12521763 (+)
G1708301 NA non-coding downstream 10959 12525585 ~ 12526040 (+)
G1708304 NA non-coding downstream 29485 12544111 ~ 12544347 (+)
G1708308 NA non-coding downstream 35070 12549696 ~ 12549954 (+)
G1708313 NA non-coding downstream 41412 12556038 ~ 12556360 (+)
G1708014 NA other upstream 260576 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 646127 11863662 ~ 11864573 (+)
G1707462 NA other upstream 856077 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 941744 11568429 ~ 11568956 (+)
G1706711 NA other upstream 1111412 11398040 ~ 11399288 (+)
G1708323 NA other downstream 63982 12578608 ~ 12584156 (+)
G1708367 NA other downstream 135060 12649686 ~ 12651577 (+)
G1708495 NA other downstream 269581 12784207 ~ 12785502 (+)
G1708635 NA other downstream 437059 12951685 ~ 12952515 (+)

Expression


Co-expression Network