G1708367


Basic Information

Item Value
gene id G1708367
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12649686 ~ 12651577 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1956882
atcatgtagacagtgaaagggagaggatcatgtagacagtgaaagggagaggatcatgtagacagtgaaagggagaggttcatgtagacagtgaaagggagaggttcatgtagacagtgaaagggagaggatcatgtagacagtgaaagggagaggatcatgtagacagtgaaagggagaggatcatgtagacagtgaaagggagagggggagagagaggatcatgtagacagtgaaagggagaggatcatgtagacagtgaaagagagaggatcatgtagacagtgaaagagaggatcatgtagacagtgaaagggagagggggagagaggatcatgtagacagtaaaagggagagggggagagagaggatcatgtagacagtggAAATGCTTGCCTAAAGAAGAACAGGTCAGTTGAGGACAGGGCAGAGAAACAGATTTTATCAGGCAATAACCAGACCAGTGGGTCTCTAACTTCAGGCTATTTTAATACTGTGATCCACTAAAGCTTTTTAACCAAGGCAGTCATTTTAGACTCTGTTTAGTCAGTGGACACCAACCAATTATCTTGGAAACACTGATGATTTACCGTCGCTACCCCACTCCAGCGTCGCTACCCCACTCCAGCGTCGCTACCccactccagcgtcgctacattactccactccagcgtcgctacatTTCTCCACTTCAGcatcgctacattactccactccagcgtcgctaccccactccagcgtcgctacattactccacttcagcatcgctacattactccactccAGCGACGCTACAATActccactccagcgtcgctacattactccacttcagcgtcgctacattactccactccagcgtcgctacattactccactccagcgtcgctacattactccactccagcgtcgctacattactccactccag

Function

NR:

description
PREDICTED: extensin-1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1956882 True 930 TUCP 0.49 2 12649686 12651577

Neighbor

gene id symbol gene type direction distance location
LOC110490703 LOC106594938 coding upstream 201378 12421633 ~ 12448308 (+)
LOC118942882 LOC106609674 coding upstream 228420 12391629 ~ 12421266 (+)
LOC110490810 LOC106576597 coding downstream 93423 12745000 ~ 12825754 (+)
LOC110516535 LOC106576596 coding downstream 177592 12829169 ~ 12837237 (+)
LOC118943029 NA coding downstream 190805 12771599 ~ 12842545 (+)
LOC118942883 LOC106596479 coding downstream 192526 12844103 ~ 12860368 (+)
cmas cmas coding downstream 215911 12867488 ~ 12885849 (+)
G1708353 NA non-coding upstream 22479 12626957 ~ 12627207 (+)
G1708338 NA non-coding upstream 42444 12606165 ~ 12607242 (+)
G1708336 LOC106576598 non-coding upstream 46275 12602117 ~ 12603411 (+)
G1708317 LOC106576569 non-coding upstream 81318 12566994 ~ 12568368 (+)
G1708314 NA non-coding upstream 89600 12557927 ~ 12560086 (+)
G1708370 NA non-coding downstream 6429 12658006 ~ 12658650 (+)
G1708410 NA non-coding downstream 61420 12712997 ~ 12732942 (+)
G1708413 NA non-coding downstream 64584 12716161 ~ 12716917 (+)
G1708422 NA non-coding downstream 74950 12726527 ~ 12727498 (+)
G1708492 NA non-coding downstream 119145 12770722 ~ 12771387 (+)
G1708323 NA other upstream 65530 12578608 ~ 12584156 (+)
G1708014 NA other upstream 399562 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 785113 11863662 ~ 11864573 (+)
G1707462 NA other upstream 995063 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 1080730 11568429 ~ 11568956 (+)
G1708495 NA other downstream 132630 12784207 ~ 12785502 (+)
G1708635 NA other downstream 300108 12951685 ~ 12952515 (+)
LOC110490642 LOC106597584 other downstream 400956 13051847 ~ 13058457 (+)
G1708702 NA other downstream 448264 13099841 ~ 13101833 (+)

Expression


Co-expression Network