G1708410


Basic Information

Item Value
gene id G1708410
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12712997 ~ 12732942 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1956928
cacccctctgtGCTGAACACACCTCAGCCCCTATCTTCCCTCCTTCCCACCCTCTCatccagacagagacagggcagTGGATGAGGAGTGACAGCTGCTGGTCTTATCACAGTGGAATGCTGCTGGTCGCTGTTCACAGTCTGATAAGACTAAATGAAACCGGGGTCATTTCAGCAGGCTGTGGTGAAATGACCAAACACTGACACAAGGCAGGGACGGAATGTactgtaagagtgtgtgtgttagtggtgggggaggggggagggattaTTTGTTCCAGCCTAGTAATATCCTGCCTCTGTTTGTCCGAGGTACATACATCCCTAGGGCATCAGTGTTAGCCTAAACCACCTTCACCACAACCCACACACTGTCAGAGACCCAGAGGACGTGCTGAGCTTCTGGTCATTGAAAATCAGTTCACCAAGCGTTCAATCAGAGAGCTAAAACTATCCCTCTACCTGAATGACATACCACTTGTTTTATTCATTCATTTCTGGAGAGAGGCAGCATGTTTGTTGTCTTTAAGAacagagaggtgtgtgagagaaagagagaggtgtgtgagagaaagagagaggtgtgtgagagaaagagagaggtgtgtgagagaaagagagaggtgtgtgagagaaagaggtagggagggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1956928 True 651 lncRNA 0.49 2 12712997 12732942

Neighbor

gene id symbol gene type direction distance location
LOC110490703 LOC106594938 coding upstream 264689 12421633 ~ 12448308 (+)
LOC118942882 LOC106609674 coding upstream 291731 12391629 ~ 12421266 (+)
LOC110490810 LOC106576597 coding downstream 12058 12745000 ~ 12825754 (+)
LOC110516535 LOC106576596 coding downstream 96227 12829169 ~ 12837237 (+)
LOC118943029 NA coding downstream 109440 12771599 ~ 12842545 (+)
LOC118942883 LOC106596479 coding downstream 111161 12844103 ~ 12860368 (+)
cmas cmas coding downstream 134546 12867488 ~ 12885849 (+)
G1708370 NA non-coding upstream 54347 12658006 ~ 12658650 (+)
G1708353 NA non-coding upstream 85790 12626957 ~ 12627207 (+)
G1708338 NA non-coding upstream 105755 12606165 ~ 12607242 (+)
G1708336 LOC106576598 non-coding upstream 109586 12602117 ~ 12603411 (+)
G1708317 LOC106576569 non-coding upstream 144629 12566994 ~ 12568368 (+)
G1708492 NA non-coding downstream 37780 12770722 ~ 12771387 (+)
G1708602 NA non-coding downstream 168341 12901283 ~ 12907083 (+)
G1708643 NA non-coding downstream 227519 12960461 ~ 12960856 (+)
G1708367 NA other upstream 61420 12649686 ~ 12651577 (+)
G1708323 NA other upstream 128841 12578608 ~ 12584156 (+)
G1708014 NA other upstream 462873 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 848424 11863662 ~ 11864573 (+)
G1707462 NA other upstream 1058374 11653901 ~ 11654623 (+)
G1708495 NA other downstream 51265 12784207 ~ 12785502 (+)
G1708635 NA other downstream 218743 12951685 ~ 12952515 (+)
LOC110490642 LOC106597584 other downstream 319591 13051847 ~ 13058457 (+)
G1708702 NA other downstream 366899 13099841 ~ 13101833 (+)

Expression


Co-expression Network