Gene
RNA
| Item | Value |
|---|---|
| gene id | G1708645 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 12961535 ~ 12961837 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107080829 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1957214 | True | 303 | lncRNA | 0.38 | 1 | 12961535 | 12961837 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490697 | LOC106576598 | coding | downstream | 231786 | 12557926 ~ 12729749 (-) |
| LOC110512965 | LOC106609709 | coding | downstream | 495655 | 12464677 ~ 12465880 (-) |
| nell2b | nel | coding | downstream | 635795 | 12200400 ~ 12325740 (-) |
| LOC110500960 | LOC106609793 | coding | downstream | 816179 | 12102755 ~ 12145356 (-) |
| LOC110499744 | LOC106609792 | coding | downstream | 835808 | 12119840 ~ 12125727 (-) |
| LOC118942884 | LOC106576594 | coding | upstream | 4062 | 12965899 ~ 12970941 (-) |
| LOC118942886 | NA | coding | upstream | 85779 | 13047616 ~ 13051529 (-) |
| LOC110490648 | apex1 | coding | upstream | 105024 | 13066861 ~ 13069913 (-) |
| LOC110490657 | LOC106576592 | coding | upstream | 113092 | 13074929 ~ 13078915 (-) |
| LOC110490660 | LOC106576586 | coding | upstream | 119515 | 13073630 ~ 13088275 (-) |
| G1708638 | NA | non-coding | downstream | 4952 | 12955924 ~ 12956583 (-) |
| G1708633 | NA | non-coding | downstream | 12917 | 12948364 ~ 12948618 (-) |
| G1708629 | NA | non-coding | downstream | 21382 | 12939558 ~ 12940153 (-) |
| G1708622 | NA | non-coding | downstream | 28124 | 12932866 ~ 12933411 (-) |
| G1708618 | NA | non-coding | downstream | 38202 | 12917301 ~ 12923333 (-) |
| G1708665 | NA | non-coding | upstream | 14621 | 12976458 ~ 12977044 (-) |
| G1708666 | NA | non-coding | upstream | 15499 | 12977336 ~ 12977614 (-) |
| G1708670 | NA | non-coding | upstream | 25665 | 12987502 ~ 12987708 (-) |
| G1708671 | NA | non-coding | upstream | 25935 | 12987772 ~ 12988054 (-) |
| G1708673 | NA | non-coding | upstream | 28287 | 12990124 ~ 12990343 (-) |
| G1708579 | LOC106578766 | other | downstream | 102632 | 12849640 ~ 12858903 (-) |
| prickle1b | LOC106576510 | other | downstream | 1007068 | 11933307 ~ 11954482 (-) |
| LOC118942880 | LOC105024872 | other | downstream | 1333082 | 11615310 ~ 11628453 (-) |
| LOC110500961 | nav3 | other | upstream | 179871 | 13100668 ~ 13608900 (-) |
| G1709215 | LOC106603265 | other | upstream | 685141 | 13646978 ~ 13678730 (-) |
| LOC110499771 | LOC106609768 | other | upstream | 1179651 | 14141473 ~ 14161581 (-) |
| LOC110518324 | LOC106604887 | other | upstream | 1300740 | 14250985 ~ 14273121 (-) |
| G1710074 | NA | other | upstream | 1723142 | 14684979 ~ 14685652 (-) |
