G1708650


Basic Information

Item Value
gene id G1708650
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12979131 ~ 12979348 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1957219
CGTAAATCATTTCCATCATTCACCAACATATTTTGCTCCGTCACCACACACTTGATACATGACGACACCTTTTGCAATTTCGACACTGTAAAGGTTCATTCACAAACACTCTCACTGCATATCTTATATATCTCAGCTTCACATGAGTAGTCAGGTACTCTTCTTCAAACATCAGTAACACCAATTGTCTTTCCTCCTTCTTTCCATCTACTACACGG

Function

NR:

description
PREDICTED: phosphatidylserine decarboxylase proenzyme-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1957219 True 218 lncRNA 0.39 1 12979131 12979348

Neighbor

gene id symbol gene type direction distance location
LOC118942885 LOC106576602 coding upstream 4338 12970913 ~ 12974793 (+)
cmas cmas coding upstream 93361 12867488 ~ 12885849 (+)
LOC118942883 LOC106596479 coding upstream 118763 12844103 ~ 12860368 (+)
LOC118943029 NA coding upstream 136609 12771599 ~ 12842545 (+)
LOC110516535 LOC106576596 coding upstream 141894 12829169 ~ 12837237 (+)
LOC110490630 LOC106609716 coding downstream 35818 13015166 ~ 13034215 (+)
LOC110490636 LOC106576583 coding downstream 57884 13037232 ~ 13051496 (+)
LOC110490642 LOC106597584 coding downstream 72499 13051847 ~ 13058457 (+)
LOC110518396 LOC106609712 coding downstream 79357 13058705 ~ 13066794 (+)
LOC110490647 LOC106576589 coding downstream 90688 13070036 ~ 13074369 (+)
G1708646 NA non-coding upstream 14362 12964541 ~ 12964769 (+)
G1708643 NA non-coding upstream 18275 12960461 ~ 12960856 (+)
G1708602 NA non-coding upstream 72048 12901283 ~ 12907083 (+)
G1708651 NA non-coding downstream 2430 12981778 ~ 12982204 (+)
G1708652 NA non-coding downstream 3141 12982489 ~ 12982769 (+)
G1708674 NA non-coding downstream 20102 12999450 ~ 12999709 (+)
G1708683 NA non-coding downstream 95581 13074929 ~ 13079923 (+)
G1708695 LOC106576586 non-coding downstream 104445 13083793 ~ 13085231 (+)
G1708635 NA other upstream 26616 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 165403 12745000 ~ 12825754 (+)
G1708495 NA other upstream 193629 12784207 ~ 12785502 (+)
G1708367 NA other upstream 327554 12649686 ~ 12651577 (+)
G1708323 NA other upstream 394975 12578608 ~ 12584156 (+)
G1708702 NA other downstream 120493 13099841 ~ 13101833 (+)
G1709276 zdhhc17 other downstream 776838 13756186 ~ 13765456 (+)
LOC110499758 osbpl8 other downstream 941210 13794979 ~ 13950916 (+)
G1709592 NA other downstream 1086501 14065849 ~ 14066683 (+)

Expression


Co-expression Network