G1708702


Basic Information

Item Value
gene id G1708702
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13099841 ~ 13101833 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1957306
GCTCATGTGACACCAAATACCATTTATTAGGGCTTTACAAAGACTACAAAATCCCTCCAGATGATTTAAATCGCTGTCTCTGTCTATTTACACGATATGTTACATACAAATgtacaaaatataaaacatttaagGACAAATGTTTCAACCAAAAAAGAAACTCTTCTCTCAAAGCAGTAAATGTTTTCAACTGAGATGTCATTGAGATTGTATGGTGTCACCATGACATAATGGTACACTGTTTGTGTTGTGAAAACATCTGGTTAACTAGGCAACTGATTGTGTcctaggggagcagggaggagtgaCTAGATGTCTGCTGTGTTGGAGGGGAGCTATgtcttactgactgtgtgtgtgtgtgtgtgtcaggctctAAGTTTAGATGCAGGCAGGCTGATGGGGTAGACCAACGATGATGCGTGGAAAAACTAAATAAAACATACATTTGTCACAGCCAAGTGATGACAACAAGAGCTTGTCCTGAGGTTGTGACAACATTTTCTGCAGAAAATGGATTCTGATAGATTTAGTTGACCAGTAGCACCTGTTATTTGGAATTGTAAATAGCACAACAGCAGGAAAATAGTACCTCAGAATGGgatgtcaaaaaaaaaaaaaaagattctacTAAAACCGAATACAAGACTGAATGAAAGTATATTCAGAAATGTTACAGTGTAATGCTTTGTGAAGTGAATTTTCGCCTGTTGAATAGGGGGATGAGTCACCAAATGCTAGTTCCAGAGAATACACAAAAGGGAAATCTGTGACAATGACCAGATTTGCTTTTCTTGATAAATTGAATGGTTTGCTCCTCAAATCAGTGATTTAGTGAACATTAACATACAgcgttttaaaataataatatcaTACTGTACATCGCATGCCTCCTGCATAGGCAAGACAGCCAATCACCACAAGACATACACCTGTTTCTGACAGCTTGTTGGTTTTTTGCATttctattttgtatttttgttgcAACGTACAATAATTCTCAGCGAGTTAAAGCGTAATATAACATCAACAGGGAAGAATGCATCTCTGATTCACTGTGCAATACTTTATTATTTACACCCCCACTTTAGCTGTGCAAAACCAACCCACTCATTAATGGAGGAAGGACAATCAAAATCCAAAATGGCTTCTGTCCCTTCCACACGCTGTTATGTAAAAGTAAAAGTCTCCTTCAAAATGTTCCCCCCTAGAAAGCTTAAAACATGCTCCTTAGGCTATAAAATCAAAAGGGTCGGGTTGTGCTCATGACATTTCAAGTGAACCCAGCTCAACTGGGTAAAAGCAACAACTAAAAAAATGCCCACCCCTTTGAACTTTTATACAATTGGTCAGTTCCACTTGCAAATACAGTATAACAGCCATTTTGCTTGTACAATATTACTGTCAGAAACAAAAGTGGATGGTTTTGGGCAACATACTTTGACAGGATCTGTGAGATATTTTGGCCTAAAAGTAGTTATAAAACTCTCCTTCACTGTACTGAAATTAAAGCACCCACTGAGACGATACGGGACCACTTCATTTGAATGGTTGTGTGTCAGGAAGTGTGTGTTCCTGTCAATCTCCTATCCACTCGGGATGGTCAGCAGGGAGCCAAAGGCTGAAGTAATACACCCGTCTCAGAGCTTTGCATTGAGAAAGCACCAATATCAGGCTTGTACTGTTCTTGACCTGGCCCTTGGATTGAAGGAGCCACCCCTCCCTTCAGCACCCATCTGTTGGCATAGTGCTGTCCATCTTTTAAGGAAAGGGTGAACAACAGGTCTGCTAGTGTGAAAAGCCTAAAAGGACTGTGGATGTGGACGGACACGTCACAGTGCCCTTGGCAGTATATCAAACGGTAACACGGGCACTTGTCCATTGTTTCACAGTAGCAGTAGGTTGGACGACACACAGTGCTCTTTTTGTGCTTGTTGGCGAGGGGTGTACGGAGGGTCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1957306 True 1961 TUCP 0.41 2 13099841 13101833

Neighbor

gene id symbol gene type direction distance location
LOC110490647 LOC106576589 coding upstream 25472 13070036 ~ 13074369 (+)
LOC110518396 LOC106609712 coding upstream 33047 13058705 ~ 13066794 (+)
LOC110490642 LOC106597584 coding upstream 41384 13051847 ~ 13058457 (+)
LOC110490636 LOC106576583 coding upstream 48345 13037232 ~ 13051496 (+)
LOC110490630 LOC106609716 coding upstream 65626 13015166 ~ 13034215 (+)
LOC110490653 ctrb coding downstream 125965 13227798 ~ 13229394 (+)
LOC118942887 NA coding downstream 129242 13231075 ~ 13231826 (+)
LOC110500963 LOC106609744 coding downstream 596684 13698517 ~ 13725137 (+)
crp crp coding downstream 637225 13739058 ~ 13748205 (+)
LOC110499758 osbpl8 coding downstream 693146 13794979 ~ 13950916 (+)
G1708701 NA non-coding upstream 240 13098994 ~ 13099601 (+)
G1708695 LOC106576586 non-coding upstream 14610 13083793 ~ 13085231 (+)
G1708683 NA non-coding upstream 19918 13074929 ~ 13079923 (+)
G1708674 NA non-coding upstream 100132 12999450 ~ 12999709 (+)
G1708652 NA non-coding upstream 117072 12982489 ~ 12982769 (+)
G1708712 NA non-coding downstream 15898 13117731 ~ 13118685 (+)
G1708730 NA non-coding downstream 45437 13147270 ~ 13147502 (+)
G1708732 NA non-coding downstream 47545 13149378 ~ 13149701 (+)
G1708734 NA non-coding downstream 49703 13151536 ~ 13151741 (+)
G1708736 NA non-coding downstream 52465 13154298 ~ 13154616 (+)
G1708635 NA other upstream 147326 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 286113 12745000 ~ 12825754 (+)
G1708495 NA other upstream 314339 12784207 ~ 12785502 (+)
G1708367 NA other upstream 448264 12649686 ~ 12651577 (+)
G1709276 zdhhc17 other downstream 654353 13756186 ~ 13765456 (+)
G1709592 NA other downstream 964016 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 1432550 14533785 ~ 14548855 (+)
G1709824 NA other downstream 1553854 14655687 ~ 14657284 (+)

Expression


Co-expression Network