G1708734


Basic Information

Item Value
gene id G1708734
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13151536 ~ 13151741 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1957342
TAAGGGGCGCCCAACCCGTTTAtaaactcagtcggggtctcaacttactgttgagagttagaatagaaGAATACACAAGGTGCTTCAGAAAGTTGGTTGTGCATCAGCCATTTCTGTTGTTGTTATCTCAGTCACTCAAtaagccatgtcagctaacaatttttagactggtaaattagtctagccagctatctaaactaataatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1957342 True 206 lncRNA 0.40 1 13151536 13151741

Neighbor

gene id symbol gene type direction distance location
LOC110490647 LOC106576589 coding upstream 77167 13070036 ~ 13074369 (+)
LOC110518396 LOC106609712 coding upstream 84742 13058705 ~ 13066794 (+)
LOC110490642 LOC106597584 coding upstream 93079 13051847 ~ 13058457 (+)
LOC110490636 LOC106576583 coding upstream 100040 13037232 ~ 13051496 (+)
LOC110490630 LOC106609716 coding upstream 117321 13015166 ~ 13034215 (+)
LOC110490653 ctrb coding downstream 76057 13227798 ~ 13229394 (+)
LOC118942887 NA coding downstream 79334 13231075 ~ 13231826 (+)
LOC110500963 LOC106609744 coding downstream 546776 13698517 ~ 13725137 (+)
crp crp coding downstream 587317 13739058 ~ 13748205 (+)
LOC110499758 osbpl8 coding downstream 643238 13794979 ~ 13950916 (+)
G1708732 NA non-coding upstream 1835 13149378 ~ 13149701 (+)
G1708730 NA non-coding upstream 4034 13147270 ~ 13147502 (+)
G1708712 NA non-coding upstream 32851 13117731 ~ 13118685 (+)
G1708701 NA non-coding upstream 51935 13098994 ~ 13099601 (+)
G1708695 LOC106576586 non-coding upstream 66305 13083793 ~ 13085231 (+)
G1708736 NA non-coding downstream 2557 13154298 ~ 13154616 (+)
G1708753 NA non-coding downstream 45175 13196916 ~ 13197213 (+)
G1708761 NA non-coding downstream 68234 13219975 ~ 13220710 (+)
G1708762 NA non-coding downstream 74711 13226452 ~ 13226775 (+)
G1708827 NA non-coding downstream 226104 13377845 ~ 13402223 (+)
G1708702 NA other upstream 49703 13099841 ~ 13101833 (+)
G1708635 NA other upstream 199021 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 337808 12745000 ~ 12825754 (+)
G1708495 NA other upstream 366034 12784207 ~ 12785502 (+)
G1709276 zdhhc17 other downstream 604445 13756186 ~ 13765456 (+)
G1709592 NA other downstream 914108 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 1382642 14533785 ~ 14548855 (+)
G1709824 NA other downstream 1503946 14655687 ~ 14657284 (+)

Expression


Co-expression Network