G1708736


Basic Information

Item Value
gene id G1708736
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13154298 ~ 13154616 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1957344
cccttgccttgatgacaactggcattctctcaaacagattcatgaggtagtcacctggaatgcatttcaattaacaggtgagccttcttaaaagttaacaATGCTTtaaagccaatcagttgtgttatgacaaggtaagggtggtatacagaagatagccctaagggtggtatacagaagatagccctatttggtaaaagtccatactATGGACTATTTGCtccaagtacatattatggcaagaaaagctcaaataagcaaagagaaatgacagtccatcattactttaagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1957344 True 293 lncRNA 0.39 2 13154298 13154616

Neighbor

gene id symbol gene type direction distance location
LOC110490647 LOC106576589 coding upstream 79929 13070036 ~ 13074369 (+)
LOC110518396 LOC106609712 coding upstream 87504 13058705 ~ 13066794 (+)
LOC110490642 LOC106597584 coding upstream 95841 13051847 ~ 13058457 (+)
LOC110490636 LOC106576583 coding upstream 102802 13037232 ~ 13051496 (+)
LOC110490630 LOC106609716 coding upstream 120083 13015166 ~ 13034215 (+)
LOC110490653 ctrb coding downstream 73182 13227798 ~ 13229394 (+)
LOC118942887 NA coding downstream 76459 13231075 ~ 13231826 (+)
LOC110500963 LOC106609744 coding downstream 543901 13698517 ~ 13725137 (+)
crp crp coding downstream 584442 13739058 ~ 13748205 (+)
LOC110499758 osbpl8 coding downstream 640363 13794979 ~ 13950916 (+)
G1708734 NA non-coding upstream 2557 13151536 ~ 13151741 (+)
G1708732 NA non-coding upstream 4597 13149378 ~ 13149701 (+)
G1708730 NA non-coding upstream 6796 13147270 ~ 13147502 (+)
G1708712 NA non-coding upstream 35613 13117731 ~ 13118685 (+)
G1708701 NA non-coding upstream 54697 13098994 ~ 13099601 (+)
G1708753 NA non-coding downstream 42300 13196916 ~ 13197213 (+)
G1708761 NA non-coding downstream 65359 13219975 ~ 13220710 (+)
G1708762 NA non-coding downstream 71836 13226452 ~ 13226775 (+)
G1708827 NA non-coding downstream 223229 13377845 ~ 13402223 (+)
G1708840 NA non-coding downstream 250224 13404840 ~ 13405199 (+)
G1708702 NA other upstream 52465 13099841 ~ 13101833 (+)
G1708635 NA other upstream 201783 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 340570 12745000 ~ 12825754 (+)
G1708495 NA other upstream 368796 12784207 ~ 12785502 (+)
G1709276 zdhhc17 other downstream 601570 13756186 ~ 13765456 (+)
G1709592 NA other downstream 911233 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 1379767 14533785 ~ 14548855 (+)
G1709824 NA other downstream 1501071 14655687 ~ 14657284 (+)

Expression


Co-expression Network