G1708846


Basic Information

Item Value
gene id G1708846
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13422982 ~ 13423183 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1957459
atattTGTTTGTTGGAGAGGAACAGCCACTAAATTTACTTGAGGCAGGTGAGAAGAAAGTGTCAAAATATAATTAATGGTACATCCCGAAGCTACAAGAAGGAAAAATGGCAAAATATAACAGTTTGATGGATAGATGAATACCTTGAAAGTTTGCTCCTCCTCATAATTACAAAGAACAAGTCTGACTCAGAGAGTTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1957459 True 202 lncRNA 0.36 1 13422982 13423183

Neighbor

gene id symbol gene type direction distance location
LOC118942887 NA coding upstream 191156 13231075 ~ 13231826 (+)
LOC110490653 ctrb coding upstream 193588 13227798 ~ 13229394 (+)
LOC110490647 LOC106576589 coding upstream 348613 13070036 ~ 13074369 (+)
LOC110518396 LOC106609712 coding upstream 356188 13058705 ~ 13066794 (+)
LOC110490642 LOC106597584 coding upstream 364525 13051847 ~ 13058457 (+)
LOC110500963 LOC106609744 coding downstream 275334 13698517 ~ 13725137 (+)
crp crp coding downstream 315875 13739058 ~ 13748205 (+)
LOC110499758 osbpl8 coding downstream 371796 13794979 ~ 13950916 (+)
LOC110516615 LOC106576514 coding downstream 564049 13987232 ~ 14007450 (+)
LOC118943011 NA coding downstream 575013 13998196 ~ 13998336 (+)
G1708844 NA non-coding upstream 4289 13418478 ~ 13418693 (+)
G1708841 NA non-coding upstream 16331 13406416 ~ 13406651 (+)
G1708840 NA non-coding upstream 17783 13404840 ~ 13405199 (+)
G1708827 NA non-coding upstream 20759 13377845 ~ 13402223 (+)
G1708762 NA non-coding upstream 196207 13226452 ~ 13226775 (+)
G1708848 NA non-coding downstream 2487 13425670 ~ 13425940 (+)
G1708855 NA non-coding downstream 22498 13445681 ~ 13445975 (+)
G1708856 NA non-coding downstream 24170 13447353 ~ 13447631 (+)
G1708863 NA non-coding downstream 36419 13459602 ~ 13460407 (+)
G1708864 NA non-coding downstream 38041 13461224 ~ 13461637 (+)
G1708702 NA other upstream 321149 13099841 ~ 13101833 (+)
G1708635 NA other upstream 470467 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 609254 12745000 ~ 12825754 (+)
G1708495 NA other upstream 637480 12784207 ~ 12785502 (+)
G1709276 zdhhc17 other downstream 333003 13756186 ~ 13765456 (+)
G1709592 NA other downstream 642666 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 1111200 14533785 ~ 14548855 (+)
G1709824 NA other downstream 1232504 14655687 ~ 14657284 (+)

Expression


Co-expression Network