G1708863


Basic Information

Item Value
gene id G1708863
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13459602 ~ 13460407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1957476
GTATTatatgtattttaacagcaacagttccaacctagactttcTTTCAACAATCATTtttacagtaagatgtacagtaggcctgatcatttctacagtaagatgtactgtaggcctgatcctttctacagtaagatgtacagtaggcctgatcatttctacagtaagatgtacagtaggcctgatcatttctacagtaagatgtacagtaggcctgatcatttctacagtaagatgtacagtaggcctgataaATTTTCATCATCTGTACTGTTACTAGGGTTGCACTctagtagctagctactgtaagaGTTAGTACACCCTTATTTCTGCTTATCATCacctgttataaaatgacaacaatgccttGCTAGCTGACTTACTTTTCCACTGTCGATGCACCGTTTCCTGAAACATTCTGCCTTGTTCTGAAAGAACTTACCACCATGCTGTGGATGGTTGGTTAGGACGTGTcgttttattcatttattcagaAAAAAGATCTGGTAAACCGCAAAGCACACAGgcatctccctctcccactcgcACAGCTACCAAACTAGAGaccgctgctaagcagagagcgcactgcacagagagcgcactgaacagagagcgcacTGCACAGAGAGCGCACTGCACAGAGAGCGCACTGcacagagagcgcactgaacagagagcgcactgaacagagagcgcactgaacagagagcgcactgaacagagagcgcactgaacagagagcgcacTGCACAGAGAGCGCACTGCACAGAGAGCGCACTGCACAGAGAGCGCACTGCACAGAG

Function

NR:

description
PREDICTED: solute carrier organic anion transporter family member 5A1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1957476 True 806 lncRNA 0.46 1 13459602 13460407

Neighbor

gene id symbol gene type direction distance location
LOC118942887 NA coding upstream 227776 13231075 ~ 13231826 (+)
LOC110490653 ctrb coding upstream 230208 13227798 ~ 13229394 (+)
LOC110490647 LOC106576589 coding upstream 385233 13070036 ~ 13074369 (+)
LOC110518396 LOC106609712 coding upstream 392808 13058705 ~ 13066794 (+)
LOC110490642 LOC106597584 coding upstream 401145 13051847 ~ 13058457 (+)
LOC110500963 LOC106609744 coding downstream 238110 13698517 ~ 13725137 (+)
crp crp coding downstream 278651 13739058 ~ 13748205 (+)
LOC110499758 osbpl8 coding downstream 334572 13794979 ~ 13950916 (+)
LOC110516615 LOC106576514 coding downstream 526825 13987232 ~ 14007450 (+)
LOC118943011 NA coding downstream 537789 13998196 ~ 13998336 (+)
G1708856 NA non-coding upstream 11971 13447353 ~ 13447631 (+)
G1708855 NA non-coding upstream 13627 13445681 ~ 13445975 (+)
G1708848 NA non-coding upstream 33662 13425670 ~ 13425940 (+)
G1708846 NA non-coding upstream 36419 13422982 ~ 13423183 (+)
G1708844 NA non-coding upstream 40909 13418478 ~ 13418693 (+)
G1708864 NA non-coding downstream 817 13461224 ~ 13461637 (+)
G1708866 NA non-coding downstream 13262 13473669 ~ 13473889 (+)
G1709086 NA non-coding downstream 47958 13508365 ~ 13516872 (+)
G1709101 NA non-coding downstream 87706 13548113 ~ 13549467 (+)
G1709109 NA non-coding downstream 105958 13566365 ~ 13567039 (+)
G1708702 NA other upstream 357769 13099841 ~ 13101833 (+)
G1708635 NA other upstream 507087 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 645874 12745000 ~ 12825754 (+)
G1708495 NA other upstream 674100 12784207 ~ 12785502 (+)
G1709276 zdhhc17 other downstream 295779 13756186 ~ 13765456 (+)
G1709592 NA other downstream 605442 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 1073976 14533785 ~ 14548855 (+)
G1709824 NA other downstream 1195280 14655687 ~ 14657284 (+)

Expression


Co-expression Network