G1708864


Basic Information

Item Value
gene id G1708864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13461224 ~ 13461637 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1957477
agagagagagtttgagtttttataaaacctttattttttactcaagtgttaacataaataatgacacactgccttttcagaaatgaaacaacaaatgttattcctaaacaaaaataaatacataacatatacattcaacttatttcagcagcaaaaaataatttcccctcctctacaaaacaaagcgctctttcgtaggcccacttctcctcaaataataggagatcttttacagctgaaaataactcaaaatctacttttattcttgctttcactaaacctttaaaaacacatcttacatcctgcccatatcccgtttctatcttatgtttcctactcagaaaaattgacatcttagcttgtcccaaaataaaatttaacatttgacattttcttttctgttgtttactatat

Function

NR:

description
pol-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1957477 True 414 lncRNA 0.30 1 13461224 13461637

Neighbor

gene id symbol gene type direction distance location
LOC118942887 NA coding upstream 229398 13231075 ~ 13231826 (+)
LOC110490653 ctrb coding upstream 231830 13227798 ~ 13229394 (+)
LOC110490647 LOC106576589 coding upstream 386855 13070036 ~ 13074369 (+)
LOC110518396 LOC106609712 coding upstream 394430 13058705 ~ 13066794 (+)
LOC110490642 LOC106597584 coding upstream 402767 13051847 ~ 13058457 (+)
LOC110500963 LOC106609744 coding downstream 236880 13698517 ~ 13725137 (+)
crp crp coding downstream 277421 13739058 ~ 13748205 (+)
LOC110499758 osbpl8 coding downstream 333342 13794979 ~ 13950916 (+)
LOC110516615 LOC106576514 coding downstream 525595 13987232 ~ 14007450 (+)
LOC118943011 NA coding downstream 536559 13998196 ~ 13998336 (+)
G1708863 NA non-coding upstream 817 13459602 ~ 13460407 (+)
G1708856 NA non-coding upstream 13593 13447353 ~ 13447631 (+)
G1708855 NA non-coding upstream 15249 13445681 ~ 13445975 (+)
G1708848 NA non-coding upstream 35284 13425670 ~ 13425940 (+)
G1708846 NA non-coding upstream 38041 13422982 ~ 13423183 (+)
G1708866 NA non-coding downstream 12032 13473669 ~ 13473889 (+)
G1709086 NA non-coding downstream 46728 13508365 ~ 13516872 (+)
G1709101 NA non-coding downstream 86476 13548113 ~ 13549467 (+)
G1709109 NA non-coding downstream 104728 13566365 ~ 13567039 (+)
G1709192 NA non-coding downstream 173774 13635411 ~ 13647478 (+)
G1708702 NA other upstream 359391 13099841 ~ 13101833 (+)
G1708635 NA other upstream 508709 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 647496 12745000 ~ 12825754 (+)
G1708495 NA other upstream 675722 12784207 ~ 12785502 (+)
G1709276 zdhhc17 other downstream 294549 13756186 ~ 13765456 (+)
G1709592 NA other downstream 604212 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 1072746 14533785 ~ 14548855 (+)
G1709824 NA other downstream 1194050 14655687 ~ 14657284 (+)

Expression


Co-expression Network