G1708866



Basic Information


Item Value
gene id G1708866
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13473669 ~ 13473889 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1957479
GTGTAAACCTGCagacacacagccctccatggaatgagtttgacacgtgcagTAGGTGGTTCTGAATAGGGCTGCTATCATGTAATAACACTgttgtaaacacatttcaaattGACTTATGAGAGACACAGCCAGTTATTGGATTATTACGGCTACAGTAGTAATGAGGACAAATCTATTCACAATAGCAGATGGTTATCAGGAGACTAATCCACCATAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1957479 True 221 lncRNA 0.41 1 13473669 13473889

Neighbor


gene id symbol gene type direction distance location
LOC118942887 NA coding upstream 241843 13231075 ~ 13231826 (+)
LOC110490653 ctrb coding upstream 244275 13227798 ~ 13229394 (+)
LOC110490647 LOC106576589 coding upstream 399300 13070036 ~ 13074369 (+)
LOC110518396 LOC106609712 coding upstream 406875 13058705 ~ 13066794 (+)
LOC110490642 LOC106597584 coding upstream 415212 13051847 ~ 13058457 (+)
LOC110500963 LOC106609744 coding downstream 224628 13698517 ~ 13725137 (+)
crp crp coding downstream 265169 13739058 ~ 13748205 (+)
LOC110499758 osbpl8 coding downstream 321090 13794979 ~ 13950916 (+)
LOC110516615 LOC106576514 coding downstream 513343 13987232 ~ 14007450 (+)
LOC118943011 NA coding downstream 524307 13998196 ~ 13998336 (+)
G1708864 NA non-coding upstream 12032 13461224 ~ 13461637 (+)
G1708863 NA non-coding upstream 13262 13459602 ~ 13460407 (+)
G1708856 NA non-coding upstream 26038 13447353 ~ 13447631 (+)
G1708855 NA non-coding upstream 27694 13445681 ~ 13445975 (+)
G1708848 NA non-coding upstream 47729 13425670 ~ 13425940 (+)
G1709086 NA non-coding downstream 34476 13508365 ~ 13516872 (+)
G1709101 NA non-coding downstream 74224 13548113 ~ 13549467 (+)
G1709109 NA non-coding downstream 92476 13566365 ~ 13567039 (+)
G1709192 NA non-coding downstream 161522 13635411 ~ 13647478 (+)
G1709194 NA non-coding downstream 166461 13640350 ~ 13679130 (+)
G1708702 NA other upstream 371836 13099841 ~ 13101833 (+)
G1708635 NA other upstream 521154 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 659941 12745000 ~ 12825754 (+)
G1708495 NA other upstream 688167 12784207 ~ 12785502 (+)
G1709276 zdhhc17 other downstream 282297 13756186 ~ 13765456 (+)
G1709592 NA other downstream 591960 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 1060494 14533785 ~ 14548855 (+)
G1709824 NA other downstream 1181798 14655687 ~ 14657284 (+)

Expression



Co-expression Network