Gene
RNA
| Item | Value |
|---|---|
| gene id | G1709252 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 13714682 ~ 13717024 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1957947 | False | 519 | lncRNA | 0.40 | 3 | 13714682 | 13717024 |
| TU1957948 | True | 487 | lncRNA | 0.40 | 4 | 13714682 | 13717024 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942887 | NA | coding | upstream | 482856 | 13231075 ~ 13231826 (+) |
| LOC110490653 | ctrb | coding | upstream | 485288 | 13227798 ~ 13229394 (+) |
| LOC110490647 | LOC106576589 | coding | upstream | 640313 | 13070036 ~ 13074369 (+) |
| LOC110518396 | LOC106609712 | coding | upstream | 647888 | 13058705 ~ 13066794 (+) |
| LOC110490642 | LOC106597584 | coding | upstream | 656225 | 13051847 ~ 13058457 (+) |
| crp | crp | coding | downstream | 22034 | 13739058 ~ 13748205 (+) |
| LOC110499758 | osbpl8 | coding | downstream | 77955 | 13794979 ~ 13950916 (+) |
| LOC110516615 | LOC106576514 | coding | downstream | 270208 | 13987232 ~ 14007450 (+) |
| LOC118943011 | NA | coding | downstream | 281172 | 13998196 ~ 13998336 (+) |
| LOC118943020 | NA | coding | downstream | 285918 | 14002942 ~ 14003071 (+) |
| G1709194 | NA | non-coding | upstream | 35552 | 13640350 ~ 13679130 (+) |
| G1709192 | NA | non-coding | upstream | 67204 | 13635411 ~ 13647478 (+) |
| G1709109 | NA | non-coding | upstream | 147643 | 13566365 ~ 13567039 (+) |
| G1709101 | NA | non-coding | upstream | 165215 | 13548113 ~ 13549467 (+) |
| G1709086 | NA | non-coding | upstream | 197810 | 13508365 ~ 13516872 (+) |
| G1709262 | NA | non-coding | downstream | 5048 | 13722072 ~ 13722329 (+) |
| LOC110500963 | LOC106609744 | non-coding | downstream | 7726 | 13698517 ~ 13725137 (+) |
| G1709268 | NA | non-coding | downstream | 31311 | 13748335 ~ 13751291 (+) |
| G1709273 | NA | non-coding | downstream | 35120 | 13752144 ~ 13752842 (+) |
| G1709286 | NA | non-coding | downstream | 53659 | 13770683 ~ 13771339 (+) |
| G1708702 | NA | other | upstream | 612849 | 13099841 ~ 13101833 (+) |
| G1708635 | NA | other | upstream | 762167 | 12951685 ~ 12952515 (+) |
| LOC110490810 | LOC106576597 | other | upstream | 900954 | 12745000 ~ 12825754 (+) |
| G1708495 | NA | other | upstream | 929180 | 12784207 ~ 12785502 (+) |
| G1709276 | zdhhc17 | other | downstream | 39162 | 13756186 ~ 13765456 (+) |
| G1709592 | NA | other | downstream | 348825 | 14065849 ~ 14066683 (+) |
| LOC118942889 | LOC106609776 | other | downstream | 817359 | 14533785 ~ 14548855 (+) |
| G1709824 | NA | other | downstream | 938663 | 14655687 ~ 14657284 (+) |
