G1709273


Basic Information

Item Value
gene id G1709273
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13752144 ~ 13752842 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1957970
ACAGGATATATGCTCCTGTCCTATGGGTCGTTCTAGCTGGGACCAGGCTTACTTTTACGTATCTCACCTGGCTAAATACAGGTTAAACATACAACCAATGGTCACTCTAACCTGGTAGAGCTGGCACATGATCAGCACAGCCACCCACATGAAGTGGAACACACTGTTGAGGAACATCCAGAACATCCAGGGAGAGCAGGAGGCGATCTGCGTCAGGTACAGCCAGAAACCATCCTTGGTGTAGTTGGTGGCGCAGTGGATCCTCCAGTCTGGGTAGAGGGGCAGAGAGGTTAGGGAAGAACCCTAGGGTGAAGGACTGACGATTAAACCTGATCCTCCAGTCTGGGTAGAGGGGCAGAGAGGTTAGGGAAGAACCCTAGGGTGATAGAGAACGACTGACGATTAAACCTGATCCCGCAGTCTGATTGACAAATGTATGAGTGATTACTTTGGCAACCTATGACTGGA

Function

NR:

description
palmitoyltransferase ZDHHC17-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1957970 True 468 lncRNA 0.50 3 13752144 13752842

Neighbor

gene id symbol gene type direction distance location
crp crp coding upstream 3939 13739058 ~ 13748205 (+)
LOC110500963 LOC106609744 coding upstream 27007 13698517 ~ 13725137 (+)
LOC118942887 NA coding upstream 520318 13231075 ~ 13231826 (+)
LOC110490653 ctrb coding upstream 522750 13227798 ~ 13229394 (+)
LOC110490647 LOC106576589 coding upstream 677775 13070036 ~ 13074369 (+)
LOC110499758 osbpl8 coding downstream 42137 13794979 ~ 13950916 (+)
LOC110516615 LOC106576514 coding downstream 234390 13987232 ~ 14007450 (+)
LOC118943011 NA coding downstream 245354 13998196 ~ 13998336 (+)
LOC118943020 NA coding downstream 250100 14002942 ~ 14003071 (+)
LOC110499761 LOC106597692 coding downstream 260930 14013772 ~ 14016243 (+)
G1709268 NA non-coding upstream 853 13748335 ~ 13751291 (+)
G1709262 NA non-coding upstream 29815 13722072 ~ 13722329 (+)
G1709252 NA non-coding upstream 35120 13714682 ~ 13717024 (+)
G1709194 NA non-coding upstream 73014 13640350 ~ 13679130 (+)
G1709286 NA non-coding downstream 17841 13770683 ~ 13771339 (+)
G1709320 NA non-coding downstream 75090 13827932 ~ 13828788 (+)
G1709322 NA non-coding downstream 83527 13836369 ~ 13836910 (+)
G1709323 NA non-coding downstream 83833 13836675 ~ 13837221 (+)
G1709333 NA non-coding downstream 112196 13865038 ~ 13867304 (+)
G1708702 NA other upstream 650311 13099841 ~ 13101833 (+)
LOC110490642 LOC106597584 other upstream 698175 13051847 ~ 13058457 (+)
G1708635 NA other upstream 799629 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 938416 12745000 ~ 12825754 (+)
G1708495 NA other upstream 966642 12784207 ~ 12785502 (+)
G1709276 zdhhc17 other downstream 3344 13756186 ~ 13765456 (+)
G1709592 NA other downstream 313007 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 781541 14533785 ~ 14548855 (+)
G1709824 NA other downstream 902845 14655687 ~ 14657284 (+)

Expression


Co-expression Network