G1709286


Basic Information

Item Value
gene id G1709286
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13770683 ~ 13771339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1957988
ATCTAGATGGGCATTCCATTTCTAAACGTTGCGTATCTAGATGGGCATTCCATGTCTAAATGTTGCGTATCTAGATGGGCATTCCATTTCTAAACGTTGCGTATCTAGATGGGCATTCCATTTCTAAATGTTGCGTATCTAGATGGGCATTCCATTTCTAAATGGGCATGGATTTCTGTTTGTGTGACCGCTTTGTGAGTTTAAATTAACTTGGTGTATTATGGCTAGATGGGGAAAGGCTAGGATGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1957988 True 249 lncRNA 0.40 2 13770683 13771339

Neighbor

gene id symbol gene type direction distance location
crp crp coding upstream 22478 13739058 ~ 13748205 (+)
LOC110500963 LOC106609744 coding upstream 45546 13698517 ~ 13725137 (+)
LOC118942887 NA coding upstream 538857 13231075 ~ 13231826 (+)
LOC110490653 ctrb coding upstream 541289 13227798 ~ 13229394 (+)
LOC110490647 LOC106576589 coding upstream 696314 13070036 ~ 13074369 (+)
LOC110499758 osbpl8 coding downstream 23640 13794979 ~ 13950916 (+)
LOC110516615 LOC106576514 coding downstream 215893 13987232 ~ 14007450 (+)
LOC118943011 NA coding downstream 226857 13998196 ~ 13998336 (+)
LOC118943020 NA coding downstream 231603 14002942 ~ 14003071 (+)
LOC110499761 LOC106597692 coding downstream 242433 14013772 ~ 14016243 (+)
G1709273 NA non-coding upstream 17841 13752144 ~ 13752842 (+)
G1709268 NA non-coding upstream 19392 13748335 ~ 13751291 (+)
G1709262 NA non-coding upstream 48354 13722072 ~ 13722329 (+)
G1709252 NA non-coding upstream 53659 13714682 ~ 13717024 (+)
G1709320 NA non-coding downstream 56593 13827932 ~ 13828788 (+)
G1709322 NA non-coding downstream 65030 13836369 ~ 13836910 (+)
G1709323 NA non-coding downstream 65336 13836675 ~ 13837221 (+)
G1709333 NA non-coding downstream 93699 13865038 ~ 13867304 (+)
G1709337 NA non-coding downstream 105145 13876484 ~ 13876935 (+)
G1709276 zdhhc17 other upstream 5227 13756186 ~ 13765456 (+)
G1708702 NA other upstream 668850 13099841 ~ 13101833 (+)
LOC110490642 LOC106597584 other upstream 716714 13051847 ~ 13058457 (+)
G1708635 NA other upstream 818168 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 956955 12745000 ~ 12825754 (+)
G1709592 NA other downstream 294510 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 763044 14533785 ~ 14548855 (+)
G1709824 NA other downstream 884348 14655687 ~ 14657284 (+)
G1709840 NA other downstream 908143 14679482 ~ 14682208 (+)

Expression


Co-expression Network