G1709320


Basic Information

Item Value
gene id G1709320
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13827932 ~ 13828788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1958039
cacagctatacccacagctatacccacagcgtagaacacagctatccccacagctatccccacagcTATacccacagctatacccacagaGTAGAACATAGCTATccccacagctatacccacagctatacccacagctatacccacagcgtagaacacagctatccccacagctatacccacagctatacccacagctatacccacagcgtagaacacagctatccccacagctatccccacagctatacccacagctatacccacagcgtagaacacagctatacccacagctatacccacagctatccccacagctatacccacagcgtagaacacagctatccccacag

Function

NR:

description
PREDICTED: gamma-hordein-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1958039 True 353 lncRNA 0.52 2 13827932 13828788

Neighbor

gene id symbol gene type direction distance location
crp crp coding upstream 79727 13739058 ~ 13748205 (+)
LOC110500963 LOC106609744 coding upstream 102795 13698517 ~ 13725137 (+)
LOC118942887 NA coding upstream 596106 13231075 ~ 13231826 (+)
LOC110490653 ctrb coding upstream 598538 13227798 ~ 13229394 (+)
LOC110490647 LOC106576589 coding upstream 753563 13070036 ~ 13074369 (+)
LOC110516615 LOC106576514 coding downstream 158444 13987232 ~ 14007450 (+)
LOC118943011 NA coding downstream 169408 13998196 ~ 13998336 (+)
LOC118943020 NA coding downstream 174154 14002942 ~ 14003071 (+)
LOC110499761 LOC106597692 coding downstream 184984 14013772 ~ 14016243 (+)
LOC118942888 NA coding downstream 188921 14017709 ~ 14018310 (+)
G1709286 NA non-coding upstream 56593 13770683 ~ 13771339 (+)
G1709273 NA non-coding upstream 75090 13752144 ~ 13752842 (+)
G1709268 NA non-coding upstream 76641 13748335 ~ 13751291 (+)
G1709262 NA non-coding upstream 105603 13722072 ~ 13722329 (+)
G1709322 NA non-coding downstream 7581 13836369 ~ 13836910 (+)
G1709323 NA non-coding downstream 7887 13836675 ~ 13837221 (+)
G1709333 NA non-coding downstream 36250 13865038 ~ 13867304 (+)
G1709337 NA non-coding downstream 47696 13876484 ~ 13876935 (+)
G1709347 NA non-coding downstream 69059 13897847 ~ 13898863 (+)
G1709276 zdhhc17 other upstream 62476 13756186 ~ 13765456 (+)
G1708702 NA other upstream 726099 13099841 ~ 13101833 (+)
LOC110490642 LOC106597584 other upstream 773963 13051847 ~ 13058457 (+)
G1708635 NA other upstream 875417 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 1014204 12745000 ~ 12825754 (+)
LOC110499758 osbpl8 other downstream 91770 13794979 ~ 13950916 (+)
G1709592 NA other downstream 237061 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 705595 14533785 ~ 14548855 (+)
G1709824 NA other downstream 826899 14655687 ~ 14657284 (+)
G1709840 NA other downstream 850694 14679482 ~ 14682208 (+)

Expression


Co-expression Network