G1709333



Basic Information


Item Value
gene id G1709333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13865038 ~ 13867304 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1958055
ctctggactgatagggttaacacctgactatatttaattaggcatctctggactgatagggttaacgactgactttattcaatatttaattaggcatctctggactgatagggttaacacctgactatatttaattaggcatctctggactgatggggttaacacctgactatatttaatatttaatttgtcatctctggactgatagggttaacacctgactatatttaattaggcatctctggactgatagggttaacacctgactatatttaattaggcatctctggactgatagggttaacacctgactatatttaattaggcatctctggactgatagggttaacgactgactttattcaatatttaattaggcatctctggactgatagggttaacacctgactatattcaatatttaattaggcatctctggactgatagggttaacacctgactatattcaatatttaattaggcatctctggactgatggggttaacacctgactatatttaattaggcatctctggac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1958055 True 538 lncRNA 0.37 2 13865038 13867304

Neighbor


gene id symbol gene type direction distance location
crp crp coding upstream 116833 13739058 ~ 13748205 (+)
LOC110500963 LOC106609744 coding upstream 139901 13698517 ~ 13725137 (+)
LOC118942887 NA coding upstream 633212 13231075 ~ 13231826 (+)
LOC110490653 ctrb coding upstream 635644 13227798 ~ 13229394 (+)
LOC110490647 LOC106576589 coding upstream 790669 13070036 ~ 13074369 (+)
LOC110516615 LOC106576514 coding downstream 119928 13987232 ~ 14007450 (+)
LOC118943011 NA coding downstream 130892 13998196 ~ 13998336 (+)
LOC118943020 NA coding downstream 135638 14002942 ~ 14003071 (+)
LOC110499761 LOC106597692 coding downstream 146468 14013772 ~ 14016243 (+)
LOC118942888 NA coding downstream 150405 14017709 ~ 14018310 (+)
G1709323 NA non-coding upstream 27817 13836675 ~ 13837221 (+)
G1709322 NA non-coding upstream 28128 13836369 ~ 13836910 (+)
G1709320 NA non-coding upstream 36250 13827932 ~ 13828788 (+)
G1709286 NA non-coding upstream 93699 13770683 ~ 13771339 (+)
G1709273 NA non-coding upstream 112196 13752144 ~ 13752842 (+)
G1709337 NA non-coding downstream 9180 13876484 ~ 13876935 (+)
G1709347 NA non-coding downstream 30543 13897847 ~ 13898863 (+)
G1709360 NA non-coding downstream 68183 13935487 ~ 13935878 (+)
G1709361 NA non-coding downstream 76414 13943718 ~ 13944313 (+)
G1709362 NA non-coding downstream 77998 13945302 ~ 13945630 (+)
G1709276 zdhhc17 other upstream 99582 13756186 ~ 13765456 (+)
G1708702 NA other upstream 763205 13099841 ~ 13101833 (+)
LOC110490642 LOC106597584 other upstream 811069 13051847 ~ 13058457 (+)
G1708635 NA other upstream 912523 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 1051310 12745000 ~ 12825754 (+)
LOC110499758 osbpl8 other downstream 53254 13794979 ~ 13950916 (+)
G1709592 NA other downstream 198545 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 667079 14533785 ~ 14548855 (+)
G1709824 NA other downstream 788383 14655687 ~ 14657284 (+)
G1709840 NA other downstream 812178 14679482 ~ 14682208 (+)

Expression



Co-expression Network