G1709363


Basic Information

Item Value
gene id G1709363
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13945662 ~ 13946403 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1958086
tgactctttattcctcctccctcctctattcatcatctcattccttcccctcgttgactctttattcctcctccctcctctattcatcatctcattccttcccctcgttgactctttattcctcctccctcccctcatcatctcattccttcccctcgttgactctttattcctcctccctcctctattcatcatctcattccttcccctcgttgactctttattcctcctccctcctctattcaccatctcattccttcccctcgttgactctttattcctcctccctcccctcatcatctcattccttcccctcgttgactctttattcctcctccctcccctcatcatctcattccttcccctcgttgactctttattcctcctccctcccatcatctcattccttcccctcgttgactctttattcctcctccctcccctcatctcattccttcccctcgttgactctttattcctcctccctcctctattcaccatctcattccttcccctcgttgactctttattcctcctccctcccctcatctcattccttcccctcgttggctctttattcctcctccctcccctcatcatctcattccttcccctcgttagctctttattcctcctccctcccctcatcatctcattccttcccctcgttgactctttattcctcctccctcctctattcatcatctcattccttcccctcgttggctctttattcctcctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1958086 True 742 lncRNA 0.49 1 13945662 13946403

Neighbor

gene id symbol gene type direction distance location
crp crp coding upstream 197457 13739058 ~ 13748205 (+)
LOC110500963 LOC106609744 coding upstream 220525 13698517 ~ 13725137 (+)
LOC118942887 NA coding upstream 713836 13231075 ~ 13231826 (+)
LOC110490653 ctrb coding upstream 716268 13227798 ~ 13229394 (+)
LOC110490647 LOC106576589 coding upstream 871293 13070036 ~ 13074369 (+)
LOC110516615 LOC106576514 coding downstream 40829 13987232 ~ 14007450 (+)
LOC118943011 NA coding downstream 51793 13998196 ~ 13998336 (+)
LOC118943020 NA coding downstream 56539 14002942 ~ 14003071 (+)
LOC110499761 LOC106597692 coding downstream 67369 14013772 ~ 14016243 (+)
LOC118942888 NA coding downstream 71306 14017709 ~ 14018310 (+)
G1709362 NA non-coding upstream 32 13945302 ~ 13945630 (+)
G1709361 NA non-coding upstream 1349 13943718 ~ 13944313 (+)
G1709360 NA non-coding upstream 9784 13935487 ~ 13935878 (+)
G1709347 NA non-coding upstream 46799 13897847 ~ 13898863 (+)
G1709337 NA non-coding upstream 68727 13876484 ~ 13876935 (+)
G1709301 NA non-coding downstream 4730 13951133 ~ 13952185 (+)
G1709580 NA non-coding downstream 112540 14058943 ~ 14059216 (+)
G1709584 NA non-coding downstream 114391 14060794 ~ 14061124 (+)
G1709594 NA non-coding downstream 120738 14067141 ~ 14067527 (+)
G1709607 NA non-coding downstream 132391 14078794 ~ 14079007 (+)
G1709276 zdhhc17 other upstream 180206 13756186 ~ 13765456 (+)
G1708702 NA other upstream 843829 13099841 ~ 13101833 (+)
LOC110490642 LOC106597584 other upstream 891693 13051847 ~ 13058457 (+)
G1708635 NA other upstream 993147 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 1131934 12745000 ~ 12825754 (+)
G1709592 NA other downstream 119446 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 587980 14533785 ~ 14548855 (+)
G1709824 NA other downstream 709284 14655687 ~ 14657284 (+)
G1709840 NA other downstream 733079 14679482 ~ 14682208 (+)
G1710321 NA other downstream 1186729 15133132 ~ 15133588 (+)

Expression


Co-expression Network