G1709580


Basic Information

Item Value
gene id G1709580
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14058943 ~ 14059216 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1958330
gagtctgtggtacccccatagagactgccataggtccggacaacaggccctccgatttgacacactgaactctatctgagaagtagttggtgaaccaggcgaggcagtcatttgagaaaccaaggctgtttgagtctgccgataagaatgcggtgattgacagagtcgaaagccttggccaggttgatgaagacagctgcacagtactgtcttttatcaatggcggatatgatatcgtttagtaccttgagcgtggcggaggtgcacctgtgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1958330 True 274 lncRNA 0.50 1 14058943 14059216

Neighbor

gene id symbol gene type direction distance location
LOC118942888 NA coding upstream 40633 14017709 ~ 14018310 (+)
LOC110499761 LOC106597692 coding upstream 42700 14013772 ~ 14016243 (+)
LOC110516615 LOC106576514 coding upstream 51493 13987232 ~ 14007450 (+)
LOC118943020 NA coding upstream 55872 14002942 ~ 14003071 (+)
LOC118943011 NA coding upstream 60607 13998196 ~ 13998336 (+)
LOC110500967 LOC106609789 coding downstream 44601 14103817 ~ 14115795 (+)
LOC110499766 LOC106576530 coding downstream 57330 14116546 ~ 14127586 (+)
LOC110499776 LOC106609772 coding downstream 222836 14282052 ~ 14288120 (+)
LOC110499784 kcnc2 coding downstream 236751 14295967 ~ 14378043 (+)
LOC110499786 pmpcb coding downstream 419039 14478255 ~ 14482429 (+)
G1709301 NA non-coding upstream 106758 13951133 ~ 13952185 (+)
G1709363 NA non-coding upstream 112540 13945662 ~ 13946403 (+)
G1709362 NA non-coding upstream 113313 13945302 ~ 13945630 (+)
G1709361 NA non-coding upstream 114630 13943718 ~ 13944313 (+)
G1709360 NA non-coding upstream 123065 13935487 ~ 13935878 (+)
G1709584 NA non-coding downstream 1578 14060794 ~ 14061124 (+)
G1709594 NA non-coding downstream 7925 14067141 ~ 14067527 (+)
G1709607 NA non-coding downstream 19578 14078794 ~ 14079007 (+)
G1709634 glipr1 non-coding downstream 68805 14128021 ~ 14219097 (+)
LOC110499758 osbpl8 other upstream 108027 13794979 ~ 13950916 (+)
G1709276 zdhhc17 other upstream 293487 13756186 ~ 13765456 (+)
G1708702 NA other upstream 957110 13099841 ~ 13101833 (+)
LOC110490642 LOC106597584 other upstream 1004974 13051847 ~ 13058457 (+)
G1708635 NA other upstream 1106428 12951685 ~ 12952515 (+)
G1709592 NA other downstream 6633 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 475167 14533785 ~ 14548855 (+)
G1709824 NA other downstream 596471 14655687 ~ 14657284 (+)
G1709840 NA other downstream 620266 14679482 ~ 14682208 (+)
G1710321 NA other downstream 1073916 15133132 ~ 15133588 (+)

Expression


Co-expression Network