G1709594


Basic Information

Item Value
gene id G1709594
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14067141 ~ 14067527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1958346
cctatgatgagcttcggatgttttcactcacgagactcccagttagatagccaatgttccttttttccaaaaatattatttttgtaggcgaaatagctccgtttgttcttcacgtttggctgagaaatcggccggaaattgcagtcacgaaaacggcaaaaaatattcaaaattagctccataatatcgacagaaacatggcaaacgttgtttataatcaatcctcaaggtgtttttcaaatatctattcgataatatatccaccgggacaattggtttttcagtaggaccgattggaataatggctacctctgtattttacgcgagaatcactctgggagcatcaggtgaccagttgcgccagtttttcaacataaatgcgtaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1958346 True 387 lncRNA 0.39 1 14067141 14067527

Neighbor

gene id symbol gene type direction distance location
LOC118942888 NA coding upstream 48831 14017709 ~ 14018310 (+)
LOC110499761 LOC106597692 coding upstream 50898 14013772 ~ 14016243 (+)
LOC110516615 LOC106576514 coding upstream 59691 13987232 ~ 14007450 (+)
LOC110500967 LOC106609789 coding downstream 36290 14103817 ~ 14115795 (+)
LOC110499766 LOC106576530 coding downstream 49019 14116546 ~ 14127586 (+)
LOC110499776 LOC106609772 coding downstream 214525 14282052 ~ 14288120 (+)
LOC110499784 kcnc2 coding downstream 228440 14295967 ~ 14378043 (+)
LOC110499786 pmpcb coding downstream 410728 14478255 ~ 14482429 (+)
G1709584 NA non-coding upstream 6017 14060794 ~ 14061124 (+)
G1709580 NA non-coding upstream 7925 14058943 ~ 14059216 (+)
G1709301 NA non-coding upstream 114956 13951133 ~ 13952185 (+)
G1709363 NA non-coding upstream 120738 13945662 ~ 13946403 (+)
G1709362 NA non-coding upstream 121511 13945302 ~ 13945630 (+)
G1709607 NA non-coding downstream 11267 14078794 ~ 14079007 (+)
G1709634 glipr1 non-coding downstream 60494 14128021 ~ 14219097 (+)
G1709644 NA non-coding downstream 68003 14135530 ~ 14212814 (+)
G1709648 NA non-coding downstream 73945 14141472 ~ 14251606 (+)
G1709592 NA other upstream 458 14065849 ~ 14066683 (+)
LOC110499758 osbpl8 other upstream 116225 13794979 ~ 13950916 (+)
G1709276 zdhhc17 other upstream 301685 13756186 ~ 13765456 (+)
G1708702 NA other upstream 965308 13099841 ~ 13101833 (+)
LOC110490642 LOC106597584 other upstream 1013172 13051847 ~ 13058457 (+)
LOC118942889 LOC106609776 other downstream 466856 14533785 ~ 14548855 (+)
G1709824 NA other downstream 588160 14655687 ~ 14657284 (+)
G1709840 NA other downstream 611955 14679482 ~ 14682208 (+)
G1710321 NA other downstream 1065605 15133132 ~ 15133588 (+)
LOC110499821 LOC106609608 other downstream 1411621 15462544 ~ 15700037 (+)

Expression


Co-expression Network