G1709648


Basic Information

Item Value
gene id G1709648
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14141472 ~ 14251606 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1958421
ATCAATGATACAAGGTTTATTCATATtcacatgttagtcatttagcagatgctcttatccagagcgacatagtagtgagtgcatatattTTCCTACTTTTTGTTACTAGTCCTCTACATACAGACCTGCCAAGCAACAATAGATGCTATGTTAATTGATTTCACCATTATATGAAAAAACGAATTAGAAAATGAACCCTAAATGAAGCTATTATTTGAACCAATTTAGAAATTAAATCTTGTCAGCCACGTCCCTTTTTCCCTGTTTCAGTTGCACAGGGAGGTTGGTGGTGCCTACAGTGACAGGGAGAGCAGCTCTTCTTATTCATTACTATTCATTAATAGATACAGGCACAAAGCTTGGTTCTCATGAGACAGTACAGTCTGCTTTTTCTAAGAATGTAGAAGCAGAGACACTTTCTGTTTGGATTCCCTGGGGTTCAGCAGACCTCTGGTATGATGGCACCTGCTGCAGGAACAAGTCCCAGTCCGGCCCAGTGACTGGCAACTCTGTCTGGAAGTGGTTCCAGAACCTGGACAAATAACCAAGACAGGTACAATATTAGGGTCCCGACACACCAGTTGAGAATCGTTGCTCTAGTATACAGCAATGCAATAGACTGGTAGTGGTAGATGCCTGGGTCTG
>TU1958420
CAAGGTTTATTCATATtcacatgttagtcatttagcagacgctcttatccagagcgacatagtagtgagtgcatatattTTCCTACTTTTTGTTACTAGTCCCCTACATACAGACCTGCCAAGCAACAATAGACGCTATGTTAATTGATTTCACCATTACATGAAAAAACGAATTAGAAAATGAACCCTAAATGAAGCTATTATTTGAACCAATTTAGAAATTAAATCTTGTCAGCCACATCCCCTTTTCCCTGTTTCAGTAGCACAGGGAGGTTGGTGGTGCCTACAGTGACAGGGAGAGCAGCTCTTCTTATTCATTACTATTCATTAATAGATACAGGCACAAAGCTTGGTTCTCATGAGACAGTACAGTCTGCTTTTTCTAAGAATGTAGAAGCAGAGACACTTTCTGTTTGGATTCCCTGGGGTTCAGCAGACCTCTGGTATGATGGCACCTGCTGCAGGAACAAGTCCCAGTCCGGCCCAGTGACTGGCAACTCTGTCTGGAAGTGGTTCCAGAACCTGGACAAATAACCAAGACAGGTACAATATTAGGGTCCCGACACACCAGTTGAGAATCGTTGCTCTAGTATACAGCAATGCAATAGACTGGTAGTGGTAGATGCCTGGGTCTG

Function

NR:

description
cytidine monophosphate-N-acetylneuraminic acid hydroxylase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1958421 False 645 lncRNA 0.42 3 14141472 14251606
TU1958420 True 635 lncRNA 0.43 2 14220311 14251606

Neighbor

gene id symbol gene type direction distance location
LOC110499766 LOC106576530 coding upstream 13886 14116546 ~ 14127586 (+)
LOC110500967 LOC106609789 coding upstream 25677 14103817 ~ 14115795 (+)
LOC118942888 NA coding upstream 123162 14017709 ~ 14018310 (+)
LOC110499761 LOC106597692 coding upstream 125229 14013772 ~ 14016243 (+)
LOC118943020 NA coding upstream 138401 14002942 ~ 14003071 (+)
LOC110499776 LOC106609772 coding downstream 30446 14282052 ~ 14288120 (+)
LOC110499784 kcnc2 coding downstream 44361 14295967 ~ 14378043 (+)
LOC110499786 pmpcb coding downstream 226649 14478255 ~ 14482429 (+)
LOC110499788 psmc2 coding downstream 236812 14488418 ~ 14493003 (+)
LOC110499790 tspan33 coding downstream 262813 14514419 ~ 14533522 (+)
G1709607 NA non-coding upstream 62465 14078794 ~ 14079007 (+)
G1709594 NA non-coding upstream 73945 14067141 ~ 14067527 (+)
G1709584 NA non-coding upstream 80348 14060794 ~ 14061124 (+)
G1709580 NA non-coding upstream 82256 14058943 ~ 14059216 (+)
G1709686 NA non-coding downstream 15550 14267156 ~ 14267380 (+)
G1709688 NA non-coding downstream 16730 14268336 ~ 14268661 (+)
G1709690 NA non-coding downstream 17839 14269445 ~ 14269670 (+)
G1709708 NA non-coding downstream 57021 14308627 ~ 14308994 (+)
G1709735 NA non-coding downstream 138677 14390283 ~ 14391796 (+)
G1709592 NA other upstream 74789 14065849 ~ 14066683 (+)
LOC110499758 osbpl8 other upstream 190556 13794979 ~ 13950916 (+)
G1709276 zdhhc17 other upstream 376016 13756186 ~ 13765456 (+)
G1708702 NA other upstream 1039639 13099841 ~ 13101833 (+)
LOC110490642 LOC106597584 other upstream 1087503 13051847 ~ 13058457 (+)
LOC118942889 LOC106609776 other downstream 282777 14533785 ~ 14548855 (+)
G1709824 NA other downstream 404081 14655687 ~ 14657284 (+)
G1709840 NA other downstream 427876 14679482 ~ 14682208 (+)
G1710321 NA other downstream 881526 15133132 ~ 15133588 (+)
LOC110499821 LOC106609608 other downstream 1227542 15462544 ~ 15700037 (+)

Expression


Co-expression Network