Gene
RNA
| Item | Value |
|---|---|
| gene id | G1709686 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 14267156 ~ 14267380 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1958474 | True | 225 | lncRNA | 0.39 | 1 | 14267156 | 14267380 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499766 | LOC106576530 | coding | upstream | 139570 | 14116546 ~ 14127586 (+) |
| LOC110500967 | LOC106609789 | coding | upstream | 151361 | 14103817 ~ 14115795 (+) |
| LOC118942888 | NA | coding | upstream | 248846 | 14017709 ~ 14018310 (+) |
| LOC110499761 | LOC106597692 | coding | upstream | 250913 | 14013772 ~ 14016243 (+) |
| LOC118943020 | NA | coding | upstream | 264085 | 14002942 ~ 14003071 (+) |
| LOC110499776 | LOC106609772 | coding | downstream | 14672 | 14282052 ~ 14288120 (+) |
| LOC110499784 | kcnc2 | coding | downstream | 28587 | 14295967 ~ 14378043 (+) |
| LOC110499786 | pmpcb | coding | downstream | 210875 | 14478255 ~ 14482429 (+) |
| LOC110499788 | psmc2 | coding | downstream | 221038 | 14488418 ~ 14493003 (+) |
| LOC110499790 | tspan33 | coding | downstream | 247039 | 14514419 ~ 14533522 (+) |
| G1709632 | LOC106609788 | non-coding | upstream | 9984 | 14148982 ~ 14257172 (+) |
| G1709648 | NA | non-coding | upstream | 15550 | 14141472 ~ 14251606 (+) |
| G1709679 | NA | non-coding | upstream | 26325 | 14240161 ~ 14240831 (+) |
| G1709665 | NA | non-coding | upstream | 41437 | 14176720 ~ 14225719 (+) |
| G1709634 | glipr1 | non-coding | upstream | 48059 | 14128021 ~ 14219097 (+) |
| G1709688 | NA | non-coding | downstream | 956 | 14268336 ~ 14268661 (+) |
| G1709690 | NA | non-coding | downstream | 2065 | 14269445 ~ 14269670 (+) |
| G1709708 | NA | non-coding | downstream | 41247 | 14308627 ~ 14308994 (+) |
| G1709735 | NA | non-coding | downstream | 122903 | 14390283 ~ 14391796 (+) |
| G1709743 | NA | non-coding | downstream | 148087 | 14415467 ~ 14415743 (+) |
| G1709592 | NA | other | upstream | 200473 | 14065849 ~ 14066683 (+) |
| LOC110499758 | osbpl8 | other | upstream | 316240 | 13794979 ~ 13950916 (+) |
| G1709276 | zdhhc17 | other | upstream | 501700 | 13756186 ~ 13765456 (+) |
| G1708702 | NA | other | upstream | 1165323 | 13099841 ~ 13101833 (+) |
| LOC110490642 | LOC106597584 | other | upstream | 1213187 | 13051847 ~ 13058457 (+) |
| LOC118942889 | LOC106609776 | other | downstream | 267003 | 14533785 ~ 14548855 (+) |
| G1709824 | NA | other | downstream | 388307 | 14655687 ~ 14657284 (+) |
| G1709840 | NA | other | downstream | 412102 | 14679482 ~ 14682208 (+) |
| G1710321 | NA | other | downstream | 865752 | 15133132 ~ 15133588 (+) |
| LOC110499821 | LOC106609608 | other | downstream | 1211768 | 15462544 ~ 15700037 (+) |
