Gene
RNA
| Item | Value |
|---|---|
| gene id | G1709688 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 14268336 ~ 14268661 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1958476 | True | 326 | lncRNA | 0.34 | 1 | 14268336 | 14268661 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499766 | LOC106576530 | coding | upstream | 140750 | 14116546 ~ 14127586 (+) |
| LOC110500967 | LOC106609789 | coding | upstream | 152541 | 14103817 ~ 14115795 (+) |
| LOC118942888 | NA | coding | upstream | 250026 | 14017709 ~ 14018310 (+) |
| LOC110499761 | LOC106597692 | coding | upstream | 252093 | 14013772 ~ 14016243 (+) |
| LOC118943020 | NA | coding | upstream | 265265 | 14002942 ~ 14003071 (+) |
| LOC110499776 | LOC106609772 | coding | downstream | 13391 | 14282052 ~ 14288120 (+) |
| LOC110499784 | kcnc2 | coding | downstream | 27306 | 14295967 ~ 14378043 (+) |
| LOC110499786 | pmpcb | coding | downstream | 209594 | 14478255 ~ 14482429 (+) |
| LOC110499788 | psmc2 | coding | downstream | 219757 | 14488418 ~ 14493003 (+) |
| LOC110499790 | tspan33 | coding | downstream | 245758 | 14514419 ~ 14533522 (+) |
| G1709686 | NA | non-coding | upstream | 956 | 14267156 ~ 14267380 (+) |
| G1709632 | LOC106609788 | non-coding | upstream | 11164 | 14148982 ~ 14257172 (+) |
| G1709648 | NA | non-coding | upstream | 16730 | 14141472 ~ 14251606 (+) |
| G1709679 | NA | non-coding | upstream | 27505 | 14240161 ~ 14240831 (+) |
| G1709665 | NA | non-coding | upstream | 42617 | 14176720 ~ 14225719 (+) |
| G1709690 | NA | non-coding | downstream | 784 | 14269445 ~ 14269670 (+) |
| G1709708 | NA | non-coding | downstream | 39966 | 14308627 ~ 14308994 (+) |
| G1709735 | NA | non-coding | downstream | 121622 | 14390283 ~ 14391796 (+) |
| G1709743 | NA | non-coding | downstream | 146806 | 14415467 ~ 14415743 (+) |
| G1709749 | NA | non-coding | downstream | 158085 | 14426746 ~ 14427138 (+) |
| G1709592 | NA | other | upstream | 201653 | 14065849 ~ 14066683 (+) |
| LOC110499758 | osbpl8 | other | upstream | 317420 | 13794979 ~ 13950916 (+) |
| G1709276 | zdhhc17 | other | upstream | 502880 | 13756186 ~ 13765456 (+) |
| G1708702 | NA | other | upstream | 1166503 | 13099841 ~ 13101833 (+) |
| LOC110490642 | LOC106597584 | other | upstream | 1214367 | 13051847 ~ 13058457 (+) |
| LOC118942889 | LOC106609776 | other | downstream | 265722 | 14533785 ~ 14548855 (+) |
| G1709824 | NA | other | downstream | 387026 | 14655687 ~ 14657284 (+) |
| G1709840 | NA | other | downstream | 410821 | 14679482 ~ 14682208 (+) |
| G1710321 | NA | other | downstream | 864471 | 15133132 ~ 15133588 (+) |
| LOC110499821 | LOC106609608 | other | downstream | 1210487 | 15462544 ~ 15700037 (+) |
