Gene
RNA
| Item | Value |
|---|---|
| gene id | G1709708 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 14308627 ~ 14308994 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1958504 | True | 239 | lncRNA | 0.51 | 3 | 14308627 | 14308994 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499776 | LOC106609772 | coding | upstream | 20507 | 14282052 ~ 14288120 (+) |
| LOC110499766 | LOC106576530 | coding | upstream | 181041 | 14116546 ~ 14127586 (+) |
| LOC110500967 | LOC106609789 | coding | upstream | 192832 | 14103817 ~ 14115795 (+) |
| LOC118942888 | NA | coding | upstream | 290317 | 14017709 ~ 14018310 (+) |
| LOC110499761 | LOC106597692 | coding | upstream | 292384 | 14013772 ~ 14016243 (+) |
| LOC110499786 | pmpcb | coding | downstream | 169261 | 14478255 ~ 14482429 (+) |
| LOC110499788 | psmc2 | coding | downstream | 179424 | 14488418 ~ 14493003 (+) |
| LOC110499790 | tspan33 | coding | downstream | 205425 | 14514419 ~ 14533522 (+) |
| LOC118942889 | LOC106609776 | coding | downstream | 224791 | 14533785 ~ 14548855 (+) |
| LOC110490791 | LOC106609779 | coding | downstream | 240523 | 14549517 ~ 14565204 (+) |
| G1709690 | NA | non-coding | upstream | 38957 | 14269445 ~ 14269670 (+) |
| G1709688 | NA | non-coding | upstream | 39966 | 14268336 ~ 14268661 (+) |
| G1709686 | NA | non-coding | upstream | 41247 | 14267156 ~ 14267380 (+) |
| G1709679 | NA | non-coding | upstream | 67796 | 14240161 ~ 14240831 (+) |
| G1709665 | NA | non-coding | upstream | 82908 | 14176720 ~ 14225719 (+) |
| G1709735 | NA | non-coding | downstream | 81289 | 14390283 ~ 14391796 (+) |
| G1709743 | NA | non-coding | downstream | 106473 | 14415467 ~ 14415743 (+) |
| G1709749 | NA | non-coding | downstream | 117752 | 14426746 ~ 14427138 (+) |
| G1709751 | NA | non-coding | downstream | 121226 | 14430220 ~ 14440159 (+) |
| G1709752 | NA | non-coding | downstream | 121458 | 14430452 ~ 14434463 (+) |
| G1709592 | NA | other | upstream | 241944 | 14065849 ~ 14066683 (+) |
| LOC110499758 | osbpl8 | other | upstream | 357711 | 13794979 ~ 13950916 (+) |
| G1709276 | zdhhc17 | other | upstream | 543171 | 13756186 ~ 13765456 (+) |
| G1708702 | NA | other | upstream | 1206794 | 13099841 ~ 13101833 (+) |
| LOC110490642 | LOC106597584 | other | upstream | 1254658 | 13051847 ~ 13058457 (+) |
| G1709824 | NA | other | downstream | 346693 | 14655687 ~ 14657284 (+) |
| G1709840 | NA | other | downstream | 370488 | 14679482 ~ 14682208 (+) |
| G1710321 | NA | other | downstream | 824138 | 15133132 ~ 15133588 (+) |
| LOC110499821 | LOC106609608 | other | downstream | 1170154 | 15462544 ~ 15700037 (+) |
