G1709735


Basic Information

Item Value
gene id G1709735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14390283 ~ 14391796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1958536
gtacactacactacagtagcttaaagttaatacactacagtagcttacagttagtacactacagtagcttacagttagtacactacagtagcttaaagttaatacactacagtagcttacagttagtacactacagtagcttacagttagtacactacagtagcttacagttagtacactacagtagcttacagttagtacactacagtagcttacagtaagtacactacagtagcttacagttaatacactacactacattagcttaaagttaatacactacagtagcttacagttagtacactacagtagcttacagtaagtacactacactacagtagcttacagttaatacactacactacagtagcttaaagttaatacactacagtagcttacagttagtacactacagtagcttacagttagtacactacagtagcttacagttagtacactacagtagcttacagtaagtacactacagtagcttacagttaatacactacactacattagcttaaagttaatacactacagtagcttacagttagtacactacagtagcttacagttaatacactacactacattatcttaaagttaatacactacagcagcttacagttagtacactacagtagcttacagtaagtacactacactacagtagcttaaagttaatacactacagtagcttacagttagtacactacagtagcttacagttagtacactacagtagcttaaagttaatacactacagtagcttacagttagtacactacagtagcttacagttagtacactacagtagcttaaagttaatacactacagtagcttacagttagtacactacagtagcttaaagTTAATACACTAC

Function

NR:

description
PREDICTED: melanoma-associated antigen C1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1958536 True 884 lncRNA 0.35 2 14390283 14391796

Neighbor

gene id symbol gene type direction distance location
LOC110499784 kcnc2 coding upstream 12240 14295967 ~ 14378043 (+)
LOC110499776 LOC106609772 coding upstream 102163 14282052 ~ 14288120 (+)
LOC110499766 LOC106576530 coding upstream 262697 14116546 ~ 14127586 (+)
LOC110500967 LOC106609789 coding upstream 274488 14103817 ~ 14115795 (+)
LOC118942888 NA coding upstream 371973 14017709 ~ 14018310 (+)
LOC110499786 pmpcb coding downstream 86459 14478255 ~ 14482429 (+)
LOC110499788 psmc2 coding downstream 96622 14488418 ~ 14493003 (+)
LOC110499790 tspan33 coding downstream 122623 14514419 ~ 14533522 (+)
LOC118942889 LOC106609776 coding downstream 141989 14533785 ~ 14548855 (+)
LOC110490791 LOC106609779 coding downstream 157721 14549517 ~ 14565204 (+)
G1709708 NA non-coding upstream 81289 14308627 ~ 14308994 (+)
G1709690 NA non-coding upstream 120613 14269445 ~ 14269670 (+)
G1709688 NA non-coding upstream 121622 14268336 ~ 14268661 (+)
G1709686 NA non-coding upstream 122903 14267156 ~ 14267380 (+)
G1709679 NA non-coding upstream 149452 14240161 ~ 14240831 (+)
G1709743 NA non-coding downstream 23671 14415467 ~ 14415743 (+)
G1709749 NA non-coding downstream 34950 14426746 ~ 14427138 (+)
G1709751 NA non-coding downstream 38424 14430220 ~ 14440159 (+)
G1709752 NA non-coding downstream 38656 14430452 ~ 14434463 (+)
G1709756 NA non-coding downstream 54216 14446012 ~ 14447532 (+)
G1709592 NA other upstream 323600 14065849 ~ 14066683 (+)
LOC110499758 osbpl8 other upstream 439367 13794979 ~ 13950916 (+)
G1709276 zdhhc17 other upstream 624827 13756186 ~ 13765456 (+)
G1708702 NA other upstream 1288450 13099841 ~ 13101833 (+)
LOC110490642 LOC106597584 other upstream 1336314 13051847 ~ 13058457 (+)
G1709824 NA other downstream 263891 14655687 ~ 14657284 (+)
G1709840 NA other downstream 287686 14679482 ~ 14682208 (+)
G1710321 NA other downstream 741336 15133132 ~ 15133588 (+)
LOC110499821 LOC106609608 other downstream 1087352 15462544 ~ 15700037 (+)

Expression


Co-expression Network