Gene
RNA
| Item | Value |
|---|---|
| gene id | G1709756 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 14446012 ~ 14447532 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110513291 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1958568 | False | 285 | lncRNA | 0.36 | 2 | 14446012 | 14447532 |
| TU1958567 | True | 292 | lncRNA | 0.35 | 2 | 14447061 | 14447532 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499784 | kcnc2 | coding | upstream | 67969 | 14295967 ~ 14378043 (+) |
| LOC110499776 | LOC106609772 | coding | upstream | 157892 | 14282052 ~ 14288120 (+) |
| LOC110499766 | LOC106576530 | coding | upstream | 318426 | 14116546 ~ 14127586 (+) |
| LOC110500967 | LOC106609789 | coding | upstream | 330217 | 14103817 ~ 14115795 (+) |
| LOC118942888 | NA | coding | upstream | 427702 | 14017709 ~ 14018310 (+) |
| LOC110499786 | pmpcb | coding | downstream | 30723 | 14478255 ~ 14482429 (+) |
| LOC110499788 | psmc2 | coding | downstream | 40886 | 14488418 ~ 14493003 (+) |
| LOC110499790 | tspan33 | coding | downstream | 66887 | 14514419 ~ 14533522 (+) |
| LOC118942889 | LOC106609776 | coding | downstream | 86253 | 14533785 ~ 14548855 (+) |
| LOC110490791 | LOC106609779 | coding | downstream | 101985 | 14549517 ~ 14565204 (+) |
| G1709751 | NA | non-coding | upstream | 5853 | 14430220 ~ 14440159 (+) |
| G1709752 | NA | non-coding | upstream | 11549 | 14430452 ~ 14434463 (+) |
| G1709749 | NA | non-coding | upstream | 18874 | 14426746 ~ 14427138 (+) |
| G1709743 | NA | non-coding | upstream | 30269 | 14415467 ~ 14415743 (+) |
| G1709735 | NA | non-coding | upstream | 54216 | 14390283 ~ 14391796 (+) |
| G1709755 | NA | non-coding | downstream | 80 | 14447612 ~ 14447875 (+) |
| G1709761 | NA | non-coding | downstream | 17131 | 14464663 ~ 14464886 (+) |
| G1709767 | NA | non-coding | downstream | 47372 | 14494904 ~ 14495399 (+) |
| G1709776 | NA | non-coding | downstream | 60788 | 14508320 ~ 14523155 (+) |
| G1709793 | NA | non-coding | downstream | 69160 | 14516692 ~ 14518026 (+) |
| G1709592 | NA | other | upstream | 379329 | 14065849 ~ 14066683 (+) |
| LOC110499758 | osbpl8 | other | upstream | 495096 | 13794979 ~ 13950916 (+) |
| G1709276 | zdhhc17 | other | upstream | 680556 | 13756186 ~ 13765456 (+) |
| G1708702 | NA | other | upstream | 1344179 | 13099841 ~ 13101833 (+) |
| LOC110490642 | LOC106597584 | other | upstream | 1392043 | 13051847 ~ 13058457 (+) |
| G1709824 | NA | other | downstream | 208155 | 14655687 ~ 14657284 (+) |
| G1709840 | NA | other | downstream | 231950 | 14679482 ~ 14682208 (+) |
| G1710321 | NA | other | downstream | 685600 | 15133132 ~ 15133588 (+) |
| LOC110499821 | LOC106609608 | other | downstream | 1031616 | 15462544 ~ 15700037 (+) |
