Gene
RNA
| Item | Value |
|---|---|
| gene id | G1709776 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 14508320 ~ 14523155 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: prestin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1958590 | True | 318 | lncRNA | 0.53 | 2 | 14508320 | 14523155 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499788 | psmc2 | coding | upstream | 15317 | 14488418 ~ 14493003 (+) |
| LOC110499786 | pmpcb | coding | upstream | 25891 | 14478255 ~ 14482429 (+) |
| LOC110499784 | kcnc2 | coding | upstream | 130277 | 14295967 ~ 14378043 (+) |
| LOC110499776 | LOC106609772 | coding | upstream | 220200 | 14282052 ~ 14288120 (+) |
| LOC110499766 | LOC106576530 | coding | upstream | 380734 | 14116546 ~ 14127586 (+) |
| LOC118942889 | LOC106609776 | coding | downstream | 10630 | 14533785 ~ 14548855 (+) |
| LOC110490791 | LOC106609779 | coding | downstream | 26362 | 14549517 ~ 14565204 (+) |
| LOC110519829 | zc3hc1 | coding | downstream | 64405 | 14587560 ~ 14596988 (+) |
| LOC110490612 | ube2h | coding | downstream | 76925 | 14600080 ~ 14631285 (+) |
| LOC118942891 | NA | coding | downstream | 824285 | 15347098 ~ 15356958 (+) |
| G1709767 | NA | non-coding | upstream | 12921 | 14494904 ~ 14495399 (+) |
| G1709761 | NA | non-coding | upstream | 43434 | 14464663 ~ 14464886 (+) |
| G1709755 | NA | non-coding | upstream | 60445 | 14447612 ~ 14447875 (+) |
| G1709756 | NA | non-coding | upstream | 60788 | 14446012 ~ 14447532 (+) |
| G1709751 | NA | non-coding | upstream | 68161 | 14430220 ~ 14440159 (+) |
| G1709797 | NA | non-coding | downstream | 231 | 14523386 ~ 14523944 (+) |
| LOC110499790 | tspan33 | non-coding | downstream | 9052 | 14514419 ~ 14533522 (+) |
| G1709800 | NA | non-coding | downstream | 42547 | 14565702 ~ 14567845 (+) |
| G1709806 | NA | non-coding | downstream | 47291 | 14570446 ~ 14571075 (+) |
| G1709804 | LOC106609781 | non-coding | downstream | 49387 | 14572542 ~ 14573998 (+) |
| G1709592 | NA | other | upstream | 441637 | 14065849 ~ 14066683 (+) |
| LOC110499758 | osbpl8 | other | upstream | 557404 | 13794979 ~ 13950916 (+) |
| G1709276 | zdhhc17 | other | upstream | 742864 | 13756186 ~ 13765456 (+) |
| G1708702 | NA | other | upstream | 1406487 | 13099841 ~ 13101833 (+) |
| LOC110490642 | LOC106597584 | other | upstream | 1454351 | 13051847 ~ 13058457 (+) |
| G1709824 | NA | other | downstream | 132532 | 14655687 ~ 14657284 (+) |
| G1709840 | NA | other | downstream | 156327 | 14679482 ~ 14682208 (+) |
| G1710321 | NA | other | downstream | 609977 | 15133132 ~ 15133588 (+) |
| LOC110499821 | LOC106609608 | other | downstream | 955993 | 15462544 ~ 15700037 (+) |
