G1709800


Basic Information

Item Value
gene id G1709800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14565702 ~ 14567845 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1958636
ACCAATACAATTATCAATTCAGCGATCGCCTTGAATCCTTGCTGTGTAGCAAATGGTTAAGTCCAGGGGAGACGACTTTTCCGACTTAAAAGGTGACTAATGACATGCGGAGTAATAGAATTATGACAGGCACAGATTTAGGCATTTCCttgatggggagtagggaatCATGGGTATTCATTGACATTTTAAACTACCCCCTTGGCAACGATCAATAAATACTATTTTTGTTCCACAAGGCAGATTTAATGGCATTGAATTCAAGGTGCCATAATATTTGGCGTTAAACCACGTTCCCAGCTCCGCATATGATCTGATCTGTGTTGATTATCTGACcctggcactctgtctgcacaTTGAGCCTTAACAGCAGAATACTGTTCAGATTCAGCTCCCAAGTACAACATGCATGAACTCTAAATCATCCATAAATACAGCAGCATAAATACATAGTCCCACATTATTGTTTGAAAAGGGCACAGAATGAACAGATTCATCAATGCATTGTTGACTGATCTGACAAGTGGTGCATATGTTATCTTTGATGGGAGGGGAAATTATAGAGAAGGAGAAGCCATCCCAAATGGGAGTCATGTTTAAATGGTCAGTATGTTTGGATCGAGCTAAACCATTACTCATGTTTCCTTCTGTCTAGGTTGTGGTACTTCAATATCATTGAAACTTTGGGAAAGGCACTGAATGAATCAGATCAATGTCAGTATTCTACTTAAACAGATCCACAAAAATCTGTTAATTTGTGTCCTATTAGCAAAGATGGAGTAAAAGTTGGAACAGAAATTGAAaattttatttaaataaaaacatttaaggaGCACCATATTCACAGTGATGGGATGATTTAGTTTACAAATGGACTTTCCACAAGCATACTAAAGTGACTGATACAGTTCAGAATGAATGGAGACCAGGTGTTTTGACTCTTTACCCATCTTCCATTGATATTAGGTTTCTACTATGGTGGGTATAAGGGCTAAGtcccttggtcaaaagtagtgcactatagagaatagggtgcaatttgggacactgATACAGAGAACTGTATATCAGAGAACTACCAGAGATAATTGTTTCAAATACCTGTATGTATATCCAAGATACCTGAATGCATATCGGATAACTGAATCAGTGTTAAATGGGTATGAGGAGTGTGGTGGGATATTAGGTGAAAGGGAAGTGGTCTATTAGAGACCCAACTACAGTAGCATCAGTCTGTTCTTCACACAAATAAACTATTCAAATCAGACTGTTATTAAGCCTTGAATAGGGAAAAGTGGTGACGACAACCTGCGTCTAAGTCTGGCATGAGGGTGGTACCAATACTACCTTCCCCTTGTAACACAAAAACATGCCAACTGTCTGGTGTAACTTTTCATCTGACTCCAAGTCTAACTTTCCTAATTGTACGTAGAGAGAAGAGAAATGTGAGAGAAATGGCGAACAGAATGTCTCATGAAAATAcatacaaataaataatcattcCTCTGAAATGGCATTCTTATTAAAGTCATGAAGGCCAATATAAAATGAGAAAGTAGTGAGGGTCGACGTGAATCTGAAAGCCGTGGAGCAAATGATTTCTGGGTCTGTAGGCAGGCGGATTGAGAGGCTAGAAGCCGTGGCGACCTTGCTTAACACAAAGACAAGACGGGGGAATGGGGGCGAGACGGGGAATGGGGGCGGGGTCAAGAAACATTCCACTTGGATTCCCTTTAAAATCTGACGTCCAAACGCAAAAAGAAAAAAGGCATCCCATTGTTTTTGGTTTTAAGGCGGGGCTACGTAGGCAGAGGGACCATCAACTCCTTCAAGGCGACCCCCTTAAAAATAAATCCTGtgttctccatccatccatccttcctcctTTATTTCAAGCGCTCGATGAGTTCCTGTGTGAGGCCCAGGTGGAGGAGCTGCATGGTGGGTAACTGAGCCAGCTGGGGGTGGGCCTTGAGCAGACGCTCCCAGCACAGCTCCAGCAGGCTGGGCACTACCAGCCAGATCTTAAACAGGGAGCCAGTCCGCTTGTTCTCGTGGATGTTCACCACACCACCGTGGATGTACATGCAGC

Function

NR:

description
kelch domain-containing protein 10 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1958636 True 2092 lncRNA 0.42 3 14565702 14567845

Neighbor

gene id symbol gene type direction distance location
LOC110490791 LOC106609779 coding upstream 498 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 16847 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 32180 14514419 ~ 14533522 (+)
LOC110499788 psmc2 coding upstream 72699 14488418 ~ 14493003 (+)
LOC110499786 pmpcb coding upstream 83273 14478255 ~ 14482429 (+)
LOC110519829 zc3hc1 coding downstream 19715 14587560 ~ 14596988 (+)
LOC110490612 ube2h coding downstream 32235 14600080 ~ 14631285 (+)
LOC118942891 NA coding downstream 779595 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 894699 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 1132774 15700619 ~ 15737550 (+)
G1709797 NA non-coding upstream 41758 14523386 ~ 14523944 (+)
G1709776 NA non-coding upstream 42547 14508320 ~ 14523155 (+)
G1709793 NA non-coding upstream 47676 14516692 ~ 14518026 (+)
G1709767 NA non-coding upstream 70303 14494904 ~ 14495399 (+)
G1709806 NA non-coding downstream 2601 14570446 ~ 14571075 (+)
G1709804 LOC106609781 non-coding downstream 4697 14572542 ~ 14573998 (+)
G1709789 NA non-coding downstream 50768 14618613 ~ 14626027 (+)
G1709842 NA non-coding downstream 114971 14682816 ~ 14683538 (+)
G1709592 NA other upstream 499019 14065849 ~ 14066683 (+)
LOC110499758 osbpl8 other upstream 614786 13794979 ~ 13950916 (+)
G1709276 zdhhc17 other upstream 800246 13756186 ~ 13765456 (+)
G1708702 NA other upstream 1463869 13099841 ~ 13101833 (+)
G1709824 NA other downstream 87842 14655687 ~ 14657284 (+)
G1709840 NA other downstream 111637 14679482 ~ 14682208 (+)
G1710321 NA other downstream 565287 15133132 ~ 15133588 (+)

Expression


Co-expression Network