Gene
RNA
| Item | Value |
|---|---|
| gene id | G1709806 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 14570446 ~ 14571075 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1958643 | False | 431 | lncRNA | 0.42 | 2 | 14570446 | 14571075 |
| TU1958644 | True | 392 | lncRNA | 0.42 | 2 | 14570446 | 14571075 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490791 | LOC106609779 | coding | upstream | 5242 | 14549517 ~ 14565204 (+) |
| LOC118942889 | LOC106609776 | coding | upstream | 21591 | 14533785 ~ 14548855 (+) |
| LOC110499790 | tspan33 | coding | upstream | 36924 | 14514419 ~ 14533522 (+) |
| LOC110499788 | psmc2 | coding | upstream | 77443 | 14488418 ~ 14493003 (+) |
| LOC110499786 | pmpcb | coding | upstream | 88017 | 14478255 ~ 14482429 (+) |
| LOC110519829 | zc3hc1 | coding | downstream | 16485 | 14587560 ~ 14596988 (+) |
| LOC110490612 | ube2h | coding | downstream | 29005 | 14600080 ~ 14631285 (+) |
| LOC118942891 | NA | coding | downstream | 776365 | 15347098 ~ 15356958 (+) |
| LOC110499821 | LOC106609608 | coding | downstream | 891469 | 15462544 ~ 15700037 (+) |
| LOC110500994 | LOC106609603 | coding | downstream | 1129544 | 15700619 ~ 15737550 (+) |
| G1709800 | NA | non-coding | upstream | 2601 | 14565702 ~ 14567845 (+) |
| G1709797 | NA | non-coding | upstream | 46502 | 14523386 ~ 14523944 (+) |
| G1709776 | NA | non-coding | upstream | 47291 | 14508320 ~ 14523155 (+) |
| G1709793 | NA | non-coding | upstream | 52420 | 14516692 ~ 14518026 (+) |
| G1709804 | LOC106609781 | non-coding | downstream | 1467 | 14572542 ~ 14573998 (+) |
| G1709789 | NA | non-coding | downstream | 47538 | 14618613 ~ 14626027 (+) |
| G1709842 | NA | non-coding | downstream | 111741 | 14682816 ~ 14683538 (+) |
| G1710104 | NA | non-coding | downstream | 125253 | 14696328 ~ 14696991 (+) |
| G1709592 | NA | other | upstream | 503763 | 14065849 ~ 14066683 (+) |
| LOC110499758 | osbpl8 | other | upstream | 619530 | 13794979 ~ 13950916 (+) |
| G1709276 | zdhhc17 | other | upstream | 804990 | 13756186 ~ 13765456 (+) |
| G1708702 | NA | other | upstream | 1468613 | 13099841 ~ 13101833 (+) |
| G1709824 | NA | other | downstream | 84612 | 14655687 ~ 14657284 (+) |
| G1709840 | NA | other | downstream | 108407 | 14679482 ~ 14682208 (+) |
| G1710321 | NA | other | downstream | 562057 | 15133132 ~ 15133588 (+) |
