G1709789



Basic Information


Item Value
gene id G1709789
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14618613 ~ 14626027 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1958623
GGGGGGGGTATGGTTTTGGATGGCCAAATAGCTAACTACAATGACATGCTGCCATGTGGAGAATcgtaggtggctcgtttcagctagttccatcttgttcttgataccatgtcttgtaatgaggtgttttgactgtcaCCTCTATGCTAATTTGGCAAAAATTCGCTAGCTAGCAAACCAACTGTAACAAAGTGTTTGAGACAAATGctcattttgcaaatgtatttgttttcaataaacaatagaggctttatttgtattttatttttacatagAGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1958623 True 278 lncRNA 0.38 2 14618613 14626027

Neighbor


gene id symbol gene type direction distance location
LOC110519829 zc3hc1 coding upstream 21625 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 53409 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 69758 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 85091 14514419 ~ 14533522 (+)
LOC110499788 psmc2 coding upstream 125610 14488418 ~ 14493003 (+)
LOC118942891 NA coding downstream 721413 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 836517 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 1074592 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 1153548 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 1244163 15870190 ~ 15889111 (+)
G1709804 LOC106609781 non-coding upstream 44615 14572542 ~ 14573998 (+)
G1709806 NA non-coding upstream 47538 14570446 ~ 14571075 (+)
G1709800 NA non-coding upstream 50768 14565702 ~ 14567845 (+)
G1709797 NA non-coding upstream 94669 14523386 ~ 14523944 (+)
LOC110490612 ube2h non-coding downstream 3318 14600080 ~ 14631285 (+)
G1709842 NA non-coding downstream 56789 14682816 ~ 14683538 (+)
G1710104 NA non-coding downstream 70301 14696328 ~ 14696991 (+)
G1710105 NA non-coding downstream 72970 14698997 ~ 14699235 (+)
G1710120 NA non-coding downstream 95095 14721122 ~ 14730114 (+)
G1709592 NA other upstream 551930 14065849 ~ 14066683 (+)
LOC110499758 osbpl8 other upstream 667697 13794979 ~ 13950916 (+)
G1709276 zdhhc17 other upstream 853157 13756186 ~ 13765456 (+)
G1708702 NA other upstream 1516780 13099841 ~ 13101833 (+)
G1709824 NA other downstream 29660 14655687 ~ 14657284 (+)
G1709840 NA other downstream 53455 14679482 ~ 14682208 (+)
G1710321 NA other downstream 507105 15133132 ~ 15133588 (+)

Expression



Co-expression Network