G1709824


Basic Information

Item Value
gene id G1709824
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14655687 ~ 14657284 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1958665
ACAGTAGTCACTTTATTGGGCGATCACATGGACTGCATGCTTGGTGTAATTCAGTCACCTAATGGATTTCCTAAATCATTCATTCTACGGAGAGGATTCTCTGTAGTGAGCTGAATTTATTCATATATCAGACCAGACCAATGCACACATATTCTGTACAAATACAAAAGTCATAGAATGCTCTGTGGTATACAGTACGGCCCCCCTCCATTTATAAAACGATTTAGAATACGTTCCTACCACTGACATCAAAAGGAACGTTtttgttaaaaaaatacaaaaagacTCAAGGGACAGCTACTCATGCATTGGAGAAACCAGTTGTGATATTCTCTGGAGTCAAAATGGCTGCCTAGACAGGTCATCAAAAAAATACCGTACTAATAAATCCTGAGTCTTCACAaatcccagtgtgtgtgtgtggagtggacTACAGTACAATAAACCACACAACAACAGGTAACATATTTCAGAAGTAATGTTTCATTGGAATCATTCTAGGCAGTGAAGGTTCTTACAGTGGACAGTTGATAATTGGGATGCTTCGTAGACATCCAGGGTACAAGAAGAACATTGACTAATATAGCAGGGGGTGGAATTAGTGGAAAGGTTCCTGGGTTTCGGCACAACCTGATTGCATATGAAGTCCATGACAACAGAGCAGAGAGTGATTGTGATTTGGTAACCGCATTCTATAACAAACATGGAATAACACTCACATAGACACAGTACCAAAACGTCATTAATGGGACTGTGATATAGGTTCAGAATGAAAGGTGAATTGGTGGTGGTGGCGTCCCCCTTGGCTTTTTGGTTATTCTTTAAGTAAATGTTAAGGTGTGCAgaaataaatactaaatactcTAACCCATGTCACACAATGCTCAACATCAAAGCTAAAAAAGGACattcaaacaaaaaaacacatctactatatacacacacacacatagtaaacAATGCATTGATAAATCCGTCACTTTATATTCCCCTGCAGatgtacataaaaaatatatatttttacattgtacaGAGCGCAGCATGTGGaaaccatagagaatgatagaggcctctactGGCCAAAAGGCTGTAttagcatgggcacagatacaaagatgagccctctatctatctctatggtgaAAACGGACTATCTCTCCCTCAGCTCCCGGCGGCGGCCATTTTGGGACTTTGTTCCAGTGGAACACACCTGCCAAGGGAGGATTCAgtgtcactgctccagagtcactACCTCTACCGCCTGGCCGTCCAGTGTGACCGTGTTGTCGATGCGTGTGGCCACAGGCGCCATGGCCACTTGTACGGGCCGGTTCCCCTGGGCTAGGCTGGTAACCACCGTCTGGTACATGCTGACTGGGATCTGCAcca

Function

NR:

description
PREDICTED: nuclear respiratory factor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1958665 True 1389 TUCP 0.43 2 14655687 14657284

Neighbor

gene id symbol gene type direction distance location
LOC110490612 ube2h coding upstream 24402 14600080 ~ 14631285 (+)
LOC110519829 zc3hc1 coding upstream 58699 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 90483 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 106832 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 122165 14514419 ~ 14533522 (+)
LOC118942891 NA coding downstream 690156 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 805260 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 1043335 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 1122291 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 1212906 15870190 ~ 15889111 (+)
G1709789 NA non-coding upstream 29660 14618613 ~ 14626027 (+)
G1709804 LOC106609781 non-coding upstream 81689 14572542 ~ 14573998 (+)
G1709806 NA non-coding upstream 84612 14570446 ~ 14571075 (+)
G1709800 NA non-coding upstream 87842 14565702 ~ 14567845 (+)
G1709842 NA non-coding downstream 25532 14682816 ~ 14683538 (+)
G1710104 NA non-coding downstream 39044 14696328 ~ 14696991 (+)
G1710105 NA non-coding downstream 41713 14698997 ~ 14699235 (+)
G1710120 NA non-coding downstream 63838 14721122 ~ 14730114 (+)
G1710133 NA non-coding downstream 81766 14739050 ~ 14739343 (+)
G1709592 NA other upstream 589004 14065849 ~ 14066683 (+)
LOC110499758 osbpl8 other upstream 704771 13794979 ~ 13950916 (+)
G1709276 zdhhc17 other upstream 890231 13756186 ~ 13765456 (+)
G1708702 NA other upstream 1553854 13099841 ~ 13101833 (+)
G1709840 NA other downstream 22198 14679482 ~ 14682208 (+)
G1710321 NA other downstream 475848 15133132 ~ 15133588 (+)
G1710901 mest other downstream 1273814 15931098 ~ 15936421 (+)

Expression


Co-expression Network