G1710133


Basic Information

Item Value
gene id G1710133
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14739050 ~ 14739343 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1959070
cagcatatgaggaaactccttcaagactgttggaaaagcattcctcatgaagctggttgagagaaggtcaagagtgtgcaaagctgtcataaacttttatggttactacatgattccatgtgttacttcatagttttgatgtcttcactattattctacaatgtagaacatagtacaaataaagaaaaacccttgaatgaataggtgtgtccaaacttttgactggtaaggtgtttgtgtgtgtgtgtgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1959070 True 251 lncRNA 0.37 2 14739050 14739343

Neighbor

gene id symbol gene type direction distance location
LOC110490612 ube2h coding upstream 107765 14600080 ~ 14631285 (+)
LOC110519829 zc3hc1 coding upstream 142062 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 173846 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 190195 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 205528 14514419 ~ 14533522 (+)
LOC118942891 NA coding downstream 608097 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 723201 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 961276 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 1040232 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 1130847 15870190 ~ 15889111 (+)
G1710120 NA non-coding upstream 8936 14721122 ~ 14730114 (+)
G1710105 NA non-coding upstream 39815 14698997 ~ 14699235 (+)
G1710104 NA non-coding upstream 42059 14696328 ~ 14696991 (+)
G1709842 NA non-coding upstream 55512 14682816 ~ 14683538 (+)
G1710140 NA non-coding downstream 9588 14748931 ~ 14749314 (+)
G1710212 NA non-coding downstream 129164 14868507 ~ 14868924 (+)
G1710223 NA non-coding downstream 160971 14900314 ~ 14907359 (+)
G1710228 NA non-coding downstream 179736 14919079 ~ 14919688 (+)
G1710232 NA non-coding downstream 185990 14925333 ~ 14926403 (+)
G1709840 NA other upstream 56842 14679482 ~ 14682208 (+)
G1709824 NA other upstream 81766 14655687 ~ 14657284 (+)
G1709592 NA other upstream 672367 14065849 ~ 14066683 (+)
LOC110499758 osbpl8 other upstream 788134 13794979 ~ 13950916 (+)
G1710321 NA other downstream 393789 15133132 ~ 15133588 (+)
G1710901 mest other downstream 1191755 15931098 ~ 15936421 (+)
LOC110499847 LOC106609634 other downstream 1786234 16318043 ~ 16528816 (+)

Expression


Co-expression Network