G1710140


Basic Information

Item Value
gene id G1710140
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14748931 ~ 14749314 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1959077
TTCAAGCATAGGCTTGAaaaggctgcatcatgttatgggtatgcttgtaatcgttaagaactggggagtttttcaggataaaaaagaaacggaatgaagctaatcacaggcaaaattctagaggaaaacctggttcagtctgctttccaccagacactgggagattaattcacctttcagcaggacaataacctaaaacacaaggccaaatctacactggagttgcttcccAAGAAGAaagtgaatattcctgagtggccgagttacagttttgacttaaatttacttgaaaatctatggcaagacctgaaaatgtttgtctagcaatgataagCAACCAATTTGTCAGAGAATGTTGAAAGGAATAATGGGCAATTGTTGCAC

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1959077 True 384 lncRNA 0.39 1 14748931 14749314

Neighbor

gene id symbol gene type direction distance location
LOC110490612 ube2h coding upstream 117646 14600080 ~ 14631285 (+)
LOC110519829 zc3hc1 coding upstream 151943 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 183727 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 200076 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 215409 14514419 ~ 14533522 (+)
LOC118942891 NA coding downstream 598126 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 713230 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 951305 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 1030261 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 1120876 15870190 ~ 15889111 (+)
G1710133 NA non-coding upstream 9588 14739050 ~ 14739343 (+)
G1710120 NA non-coding upstream 18817 14721122 ~ 14730114 (+)
G1710105 NA non-coding upstream 49696 14698997 ~ 14699235 (+)
G1710104 NA non-coding upstream 51940 14696328 ~ 14696991 (+)
G1709842 NA non-coding upstream 65393 14682816 ~ 14683538 (+)
G1710212 NA non-coding downstream 119193 14868507 ~ 14868924 (+)
G1710223 NA non-coding downstream 151000 14900314 ~ 14907359 (+)
G1710228 NA non-coding downstream 169765 14919079 ~ 14919688 (+)
G1710232 NA non-coding downstream 176019 14925333 ~ 14926403 (+)
G1710246 NA non-coding downstream 195824 14945138 ~ 14945420 (+)
G1709840 NA other upstream 66723 14679482 ~ 14682208 (+)
G1709824 NA other upstream 91647 14655687 ~ 14657284 (+)
G1709592 NA other upstream 682248 14065849 ~ 14066683 (+)
LOC110499758 osbpl8 other upstream 798015 13794979 ~ 13950916 (+)
G1710321 NA other downstream 383818 15133132 ~ 15133588 (+)
G1710901 mest other downstream 1181784 15931098 ~ 15936421 (+)
LOC110499847 LOC106609634 other downstream 1776263 16318043 ~ 16528816 (+)

Expression


Co-expression Network