G1710228


Basic Information

Item Value
gene id G1710228
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14919079 ~ 14919688 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1959187
ctctctctgtatctctctctctctgtctctctctctctctctgtatctctttctctctgtctctctctctctctctctctgtatctctctctctctctctgtatctctctctctctgtgtatctctctctctgtatctctctctctctgtttctctctctctttctgtatctctctctctgtatctctctatctctctctctgtttctctctatctgtatctctctctgtatctctctctctctctctctctctgtttccctctatctgtatctctcgctgtatctctctctctgtatctctctctctctgtatctctctctctctgaatctctctctctgtctgtatctctctgtctgtatctctctctttctctctggctcactgtctctctacctgtatctctctctttgtatcaATTCAactcaatttaagggctttattgccaTGGTAAATATGTTAGCAATGCCAAAGCAAgttaagtagataataaacaaaagtgaaataaacaattaacagtaaacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1959187 True 526 lncRNA 0.40 2 14919079 14919688

Neighbor

gene id symbol gene type direction distance location
LOC110490612 ube2h coding upstream 287794 14600080 ~ 14631285 (+)
LOC110519829 zc3hc1 coding upstream 322091 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 353875 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 370224 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 385557 14514419 ~ 14533522 (+)
LOC118942891 NA coding downstream 427752 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 542856 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 780931 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 859887 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 950502 15870190 ~ 15889111 (+)
G1710223 NA non-coding upstream 11720 14900314 ~ 14907359 (+)
G1710212 NA non-coding upstream 50155 14868507 ~ 14868924 (+)
G1710140 NA non-coding upstream 169765 14748931 ~ 14749314 (+)
G1710133 NA non-coding upstream 179736 14739050 ~ 14739343 (+)
G1710120 NA non-coding upstream 188965 14721122 ~ 14730114 (+)
G1710232 NA non-coding downstream 5645 14925333 ~ 14926403 (+)
G1710246 NA non-coding downstream 25450 14945138 ~ 14945420 (+)
G1710247 NA non-coding downstream 27058 14946746 ~ 14947444 (+)
G1710248 NA non-coding downstream 27991 14947679 ~ 14948264 (+)
G1710250 NA non-coding downstream 29395 14949083 ~ 14949653 (+)
G1709840 NA other upstream 236871 14679482 ~ 14682208 (+)
G1709824 NA other upstream 261795 14655687 ~ 14657284 (+)
G1709592 NA other upstream 852396 14065849 ~ 14066683 (+)
LOC110499758 osbpl8 other upstream 968163 13794979 ~ 13950916 (+)
G1710321 NA other downstream 213444 15133132 ~ 15133588 (+)
G1710901 mest other downstream 1011410 15931098 ~ 15936421 (+)
LOC110499847 LOC106609634 other downstream 1605889 16318043 ~ 16528816 (+)

Expression


Co-expression Network