G1710247


Basic Information

Item Value
gene id G1710247
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14946746 ~ 14947444 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1959207
gagagagagcatgttcgGCTCACTTGGCAATTGTGTGTCTAAAATTAACATCCTATCAACTCAGGTGAATGGCTGAGTAAAAATAGTCAGTTGCTgatggagatgagaggagagaatggagacagagagacagagtgtccTGATGAAGtgatgtgtctgtgttgatgggtagagtctacagtcctaatgaagttctgtgttgatgggtagagtctacagtcctgatgaagttatgtgtctgtgttgatgggtagagtctacagtcctaatgaagttctgtgttgatgggtagagtctacagtcctgatgaagttatgtgtctgtgttgatgggtagagtctacagtcctaatgaagttctgtgttgatgggtagagtctacagtgctgatgaagttatgtgtctgtgtgttgatgggtagagtctacagtcctaatgaagttatgtgttgatgggtagagtctacagtcctaatgaagttctgtgttgatgggtagagtctacagtcctaatgaagttctgtgttgatgggtagagtctacagtcctaatgaagttctgtgttgatgggtagagtctacagtcctaatgaagttctgtgttgatgggtagagtctacagtcctaatgaagttctgtgttgatgggtagagtctacagtgctgatgaagttctgtgcctgtgttgatgggtagagtctac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1959207 True 699 lncRNA 0.43 1 14946746 14947444

Neighbor

gene id symbol gene type direction distance location
LOC110490612 ube2h coding upstream 315461 14600080 ~ 14631285 (+)
LOC110519829 zc3hc1 coding upstream 349758 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 381542 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 397891 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 413224 14514419 ~ 14533522 (+)
LOC118942891 NA coding downstream 399996 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 515100 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 753175 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 832131 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 922746 15870190 ~ 15889111 (+)
G1710246 NA non-coding upstream 1326 14945138 ~ 14945420 (+)
G1710232 NA non-coding upstream 20343 14925333 ~ 14926403 (+)
G1710228 NA non-coding upstream 27058 14919079 ~ 14919688 (+)
G1710223 NA non-coding upstream 39387 14900314 ~ 14907359 (+)
G1710212 NA non-coding upstream 77822 14868507 ~ 14868924 (+)
G1710248 NA non-coding downstream 235 14947679 ~ 14948264 (+)
G1710250 NA non-coding downstream 1639 14949083 ~ 14949653 (+)
G1710251 NA non-coding downstream 12338 14959782 ~ 14960229 (+)
G1710252 NA non-coding downstream 18438 14965882 ~ 14966152 (+)
G1710254 NA non-coding downstream 26925 14974369 ~ 14974643 (+)
G1709840 NA other upstream 264538 14679482 ~ 14682208 (+)
G1709824 NA other upstream 289462 14655687 ~ 14657284 (+)
G1709592 NA other upstream 880063 14065849 ~ 14066683 (+)
LOC110499758 osbpl8 other upstream 995830 13794979 ~ 13950916 (+)
G1710321 NA other downstream 185688 15133132 ~ 15133588 (+)
G1710901 mest other downstream 983654 15931098 ~ 15936421 (+)
LOC110499847 LOC106609634 other downstream 1578133 16318043 ~ 16528816 (+)

Expression


Co-expression Network