Gene
RNA
| Item | Value |
|---|---|
| gene id | G1710273 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 15012584 ~ 15013201 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1959234 | False | 370 | lncRNA | 0.41 | 2 | 15012584 | 15013201 |
| TU1959237 | False | 331 | lncRNA | 0.41 | 3 | 15012584 | 15013201 |
| TU1959240 | True | 404 | lncRNA | 0.42 | 2 | 15012584 | 15013201 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490612 | ube2h | coding | upstream | 381299 | 14600080 ~ 14631285 (+) |
| LOC110519829 | zc3hc1 | coding | upstream | 415596 | 14587560 ~ 14596988 (+) |
| LOC110490791 | LOC106609779 | coding | upstream | 447380 | 14549517 ~ 14565204 (+) |
| LOC118942889 | LOC106609776 | coding | upstream | 463729 | 14533785 ~ 14548855 (+) |
| LOC110499790 | tspan33 | coding | upstream | 479062 | 14514419 ~ 14533522 (+) |
| LOC118942891 | NA | coding | downstream | 334239 | 15347098 ~ 15356958 (+) |
| LOC110499821 | LOC106609608 | coding | downstream | 449343 | 15462544 ~ 15700037 (+) |
| LOC110500994 | LOC106609603 | coding | downstream | 687418 | 15700619 ~ 15737550 (+) |
| col7a1l | LOC106576558 | coding | downstream | 766374 | 15779575 ~ 15866718 (+) |
| LOC110490786 | LOC106576567 | coding | downstream | 856989 | 15870190 ~ 15889111 (+) |
| G1710262 | NA | non-coding | upstream | 20690 | 14991494 ~ 14991894 (+) |
| G1710261 | NA | non-coding | upstream | 23070 | 14989303 ~ 14989514 (+) |
| G1710256 | NA | non-coding | upstream | 29339 | 14983028 ~ 14983245 (+) |
| G1710255 | NA | non-coding | upstream | 29786 | 14982574 ~ 14982798 (+) |
| G1710254 | NA | non-coding | upstream | 37941 | 14974369 ~ 14974643 (+) |
| G1710309 | NA | non-coding | downstream | 83528 | 15096729 ~ 15096964 (+) |
| G1710311 | NA | non-coding | downstream | 86459 | 15099660 ~ 15099925 (+) |
| G1710312 | NA | non-coding | downstream | 91326 | 15104527 ~ 15104790 (+) |
| G1710316 | NA | non-coding | downstream | 104579 | 15117780 ~ 15117979 (+) |
| G1710320 | NA | non-coding | downstream | 110146 | 15123347 ~ 15123694 (+) |
| G1709840 | NA | other | upstream | 330376 | 14679482 ~ 14682208 (+) |
| G1709824 | NA | other | upstream | 355300 | 14655687 ~ 14657284 (+) |
| G1709592 | NA | other | upstream | 945901 | 14065849 ~ 14066683 (+) |
| LOC110499758 | osbpl8 | other | upstream | 1061668 | 13794979 ~ 13950916 (+) |
| G1710321 | NA | other | downstream | 119931 | 15133132 ~ 15133588 (+) |
| G1710901 | mest | other | downstream | 917897 | 15931098 ~ 15936421 (+) |
| LOC110499847 | LOC106609634 | other | downstream | 1512376 | 16318043 ~ 16528816 (+) |
