G1710309


Basic Information

Item Value
gene id G1710309
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 15096729 ~ 15096964 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1959277
agctggggggggggtcagggcaTTCACAGATACAACAACCTCCTTTAATAAACGAAGGCCACTGATCTACGAATGCATGAGTGAACAACGGCTATTCACCCCATTGGAGAGTGGATCAAGACGAGTCATTGACAGAGACCAGGGTCTGGTTCATGGTAGGAAAAACATTGAGGGGTCCTGAACACTGAAGACTGTTTCACAGCTAAGGACTGGCCCTAGGGCTAAAATACCACGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1959277 True 236 lncRNA 0.50 1 15096729 15096964

Neighbor

gene id symbol gene type direction distance location
LOC110490612 ube2h coding upstream 465444 14600080 ~ 14631285 (+)
LOC110519829 zc3hc1 coding upstream 499741 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 531525 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 547874 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 563207 14514419 ~ 14533522 (+)
LOC118942891 NA coding downstream 250476 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 365580 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 603655 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 682611 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 773226 15870190 ~ 15889111 (+)
G1710273 NA non-coding upstream 83528 15012584 ~ 15013201 (+)
G1710262 NA non-coding upstream 104835 14991494 ~ 14991894 (+)
G1710261 NA non-coding upstream 107215 14989303 ~ 14989514 (+)
G1710256 NA non-coding upstream 113484 14983028 ~ 14983245 (+)
G1710255 NA non-coding upstream 113931 14982574 ~ 14982798 (+)
G1710311 NA non-coding downstream 2696 15099660 ~ 15099925 (+)
G1710312 NA non-coding downstream 7563 15104527 ~ 15104790 (+)
G1710316 NA non-coding downstream 20816 15117780 ~ 15117979 (+)
G1710320 NA non-coding downstream 26383 15123347 ~ 15123694 (+)
G1710328 NA non-coding downstream 62519 15159483 ~ 15159769 (+)
G1709840 NA other upstream 414521 14679482 ~ 14682208 (+)
G1709824 NA other upstream 439445 14655687 ~ 14657284 (+)
G1709592 NA other upstream 1030046 14065849 ~ 14066683 (+)
LOC110499758 osbpl8 other upstream 1145813 13794979 ~ 13950916 (+)
G1710321 NA other downstream 36168 15133132 ~ 15133588 (+)
G1710901 mest other downstream 834134 15931098 ~ 15936421 (+)
LOC110499847 LOC106609634 other downstream 1428613 16318043 ~ 16528816 (+)

Expression


Co-expression Network