G1710328


Basic Information

Item Value
gene id G1710328
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 15159483 ~ 15159769 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1959296
tggtagagtagtagtgttgtattaactagtctctatgtccctgtcagatgacatggtagagtagtagtgttgtattaactagtctctatgtccctgtcagatgacatggtagagtagtagtgtTGTATTAACTAGTCTTTATGTCCCTGTCAGATgacatggtagagtagtagtgttgtattaactagtctctatgtccctgtcagatgacatggtagagtagtagtgttgtattaactagtctctatgtccctgtcagatgacatggtagagtagtagtgttgtat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1959296 True 287 lncRNA 0.39 1 15159483 15159769

Neighbor

gene id symbol gene type direction distance location
LOC110490612 ube2h coding upstream 528198 14600080 ~ 14631285 (+)
LOC110519829 zc3hc1 coding upstream 562495 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 594279 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 610628 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 625961 14514419 ~ 14533522 (+)
LOC118942891 NA coding downstream 187671 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 302775 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 540850 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 619806 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 710421 15870190 ~ 15889111 (+)
G1710320 NA non-coding upstream 35789 15123347 ~ 15123694 (+)
G1710316 NA non-coding upstream 41504 15117780 ~ 15117979 (+)
G1710312 NA non-coding upstream 54693 15104527 ~ 15104790 (+)
G1710311 NA non-coding upstream 59558 15099660 ~ 15099925 (+)
G1710309 NA non-coding upstream 62519 15096729 ~ 15096964 (+)
G1710329 NA non-coding downstream 300 15160069 ~ 15161799 (+)
G1710341 NA non-coding downstream 31441 15191210 ~ 15191508 (+)
G1710346 NA non-coding downstream 43257 15203026 ~ 15203326 (+)
G1710350 NA non-coding downstream 60817 15220586 ~ 15221328 (+)
G1710353 NA non-coding downstream 71851 15231620 ~ 15231830 (+)
G1710321 NA other upstream 25895 15133132 ~ 15133588 (+)
G1709840 NA other upstream 477275 14679482 ~ 14682208 (+)
G1709824 NA other upstream 502199 14655687 ~ 14657284 (+)
G1709592 NA other upstream 1092800 14065849 ~ 14066683 (+)
G1710901 mest other downstream 771329 15931098 ~ 15936421 (+)
LOC110499847 LOC106609634 other downstream 1365808 16318043 ~ 16528816 (+)
G1711795 NA other downstream 1560151 16719920 ~ 16720552 (+)

Expression


Co-expression Network