G1710341



Basic Information


Item Value
gene id G1710341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 15191210 ~ 15191508 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1959310
atgccaagcatcgacGCGCAAGCCTTGACAATGccaagctcaccgccattggactctgtagcagtggaaacgcattctctggagtaatgaatcacgcttcaccatctggcagtctgacggacgaatcggACGAATGCATAATGcctactgtaaagtttggtggaggacgaataatgttctggggctgtttatcCATGGTttgagctaggccccttagttccagtgaagggaaatcttaacactacagcatccaatgacattctagacgattctgtggttccaactttgtggcaacagtt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1959310 True 299 lncRNA 0.48 1 15191210 15191508
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110490612 ube2h coding upstream 559925 14600080 ~ 14631285 (+)
LOC110519829 zc3hc1 coding upstream 594222 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 626006 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 642355 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 657688 14514419 ~ 14533522 (+)
LOC118942891 NA coding downstream 155932 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 271036 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 509111 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 588067 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 678682 15870190 ~ 15889111 (+)
G1710329 NA non-coding upstream 29411 15160069 ~ 15161799 (+)
G1710328 NA non-coding upstream 31441 15159483 ~ 15159769 (+)
G1710320 NA non-coding upstream 67516 15123347 ~ 15123694 (+)
G1710316 NA non-coding upstream 73231 15117780 ~ 15117979 (+)
G1710312 NA non-coding upstream 86420 15104527 ~ 15104790 (+)
G1710346 NA non-coding downstream 11518 15203026 ~ 15203326 (+)
G1710350 NA non-coding downstream 29078 15220586 ~ 15221328 (+)
G1710353 NA non-coding downstream 40112 15231620 ~ 15231830 (+)
G1710356 NA non-coding downstream 50037 15241545 ~ 15241825 (+)
G1710361 plxna4 non-coding downstream 70257 15261765 ~ 15262821 (+)
G1710321 NA other upstream 57622 15133132 ~ 15133588 (+)
G1709840 NA other upstream 509002 14679482 ~ 14682208 (+)
G1709824 NA other upstream 533926 14655687 ~ 14657284 (+)
G1709592 NA other upstream 1124527 14065849 ~ 14066683 (+)
G1710901 mest other downstream 739590 15931098 ~ 15936421 (+)
LOC110499847 LOC106609634 other downstream 1334069 16318043 ~ 16528816 (+)
G1711795 NA other downstream 1528412 16719920 ~ 16720552 (+)

Expression


G1710341 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

G1710341 Expression in each Bioproject

Bar chart with 10 bars.
G1710341 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 16.
End of interactive chart.

Co-expression Network