G1710353


Basic Information

Item Value
gene id G1710353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 15231620 ~ 15231830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1959326
ctctctctctctctctctctctctctgtctctctctctctctgtctccctctctctctctctctctctctctctctctctctctctctctctcctatctatccactctctctccccctctctctctctctcctatctatccactctctctccctctctctctctcctatctatacactctctctccctctctctctctcctatctatccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1959326 True 211 lncRNA 0.50 1 15231620 15231830

Neighbor

gene id symbol gene type direction distance location
LOC110490612 ube2h coding upstream 600335 14600080 ~ 14631285 (+)
LOC110519829 zc3hc1 coding upstream 634632 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 666416 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 682765 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 698098 14514419 ~ 14533522 (+)
LOC118942891 NA coding downstream 115610 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 230714 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 468789 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 547745 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 638360 15870190 ~ 15889111 (+)
G1710350 NA non-coding upstream 10292 15220586 ~ 15221328 (+)
G1710346 NA non-coding upstream 28294 15203026 ~ 15203326 (+)
G1710341 NA non-coding upstream 40112 15191210 ~ 15191508 (+)
G1710329 NA non-coding upstream 69821 15160069 ~ 15161799 (+)
G1710328 NA non-coding upstream 71851 15159483 ~ 15159769 (+)
G1710356 NA non-coding downstream 9715 15241545 ~ 15241825 (+)
G1710361 plxna4 non-coding downstream 29935 15261765 ~ 15262821 (+)
G1710344 NA non-coding downstream 48117 15279947 ~ 15283240 (+)
G1710367 NA non-coding downstream 69301 15301131 ~ 15301414 (+)
G1710603 NA non-coding downstream 80254 15312084 ~ 15312294 (+)
G1710321 NA other upstream 98032 15133132 ~ 15133588 (+)
G1709840 NA other upstream 549412 14679482 ~ 14682208 (+)
G1709824 NA other upstream 574336 14655687 ~ 14657284 (+)
G1709592 NA other upstream 1164937 14065849 ~ 14066683 (+)
G1710901 mest other downstream 699268 15931098 ~ 15936421 (+)
LOC110499847 LOC106609634 other downstream 1293747 16318043 ~ 16528816 (+)
G1711795 NA other downstream 1488090 16719920 ~ 16720552 (+)

Expression


Co-expression Network