G1710344


Basic Information

Item Value
gene id G1710344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 15279947 ~ 15283240 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1959316
TCCCAgtgctgacaccatcaagttcaaccattaataacaacccccgtgctgacaccatcaagttcaaccattaataacaatcccagtgctgacaccatcaagttcaaccattaataacaatcccagtgctgacaccatcaagttcaaccattaataacaaccccagtgctgacaccatcaagttcaaccaTTAATAACAACCCCAGTGCTGACATCAACAAGTTCAACCATCAATAACAACCCCAgtgctgacaccatcaagttcaaccattaataacaacccccgtgctgacaccatcaagttcaaACATTAATAACAACCCCAgtgctgacaccatcaagtttaaccattaataacaaccccagagctgacaccatcaagttcaaccATTAATAACAACCCCAgtgctgacaccatcaagttcaaccattaataacaacccccgtgctgacaccatcaagttcaaACATTAATAACAACCTCAgtgctgacaccatcaagtttaaccattaataacaaccccagagctgacaccatcaagttcaaccattaataacaaccccagagctgacaccatcaagttcaaccattaataacaacccccgtgctgacaccatcaagttcaaccattaataacaacccccgtgctgacaccatcaagttcaaccattaataacaacccccgtgctgacaccatcaagttcaaccattaataacaacccaagtgctgacaccatcaagttcaaccattaataacaaccccagtgctgacaccatcaagttcaaccaCCATAACCCTTTCAAACACAACTAAGCTACCACTCCTTTGGTCACTGTCCCCTCATCACTACATTCATCACTTTCCCCTCATCACTACATTCATCACTTTTCCCTCATCACTACATTCATCACTTTCCCTCATCACTACATTCATCACTTTCCCCTCATCACTACATTCATCACTTTTCCCTCATCACTACATTCATCACTTTCCCTCATCACTACATTCATCACTTTCCCTCATCACTACATTCATCACTTTCCCTCATCACTACATTCATCACTGTCCCCTCATCACTACATTCATCACTGTCCCCTCATCACTACATTCATCACTTTTCCCTCATCACTACATTCATCACTTTTCCCTCATCACTACATTCATCACTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1959316 True 1174 lncRNA 0.42 4 15279947 15283240

Neighbor

gene id symbol gene type direction distance location
LOC110490612 ube2h coding upstream 648662 14600080 ~ 14631285 (+)
LOC110519829 zc3hc1 coding upstream 682959 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 714743 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 731092 14533785 ~ 14548855 (+)
LOC110499790 tspan33 coding upstream 746425 14514419 ~ 14533522 (+)
LOC118942891 NA coding downstream 64200 15347098 ~ 15356958 (+)
LOC110499821 LOC106609608 coding downstream 179304 15462544 ~ 15700037 (+)
LOC110500994 LOC106609603 coding downstream 417379 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 496335 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 586950 15870190 ~ 15889111 (+)
G1710361 plxna4 non-coding upstream 17126 15261765 ~ 15262821 (+)
G1710356 NA non-coding upstream 38122 15241545 ~ 15241825 (+)
G1710353 NA non-coding upstream 48117 15231620 ~ 15231830 (+)
G1710350 NA non-coding upstream 58619 15220586 ~ 15221328 (+)
G1710346 NA non-coding upstream 76621 15203026 ~ 15203326 (+)
G1710367 NA non-coding downstream 17891 15301131 ~ 15301414 (+)
G1710603 NA non-coding downstream 28844 15312084 ~ 15312294 (+)
G1710606 NA non-coding downstream 30591 15313831 ~ 15314234 (+)
G1710619 NA non-coding downstream 53384 15336624 ~ 15336869 (+)
G1710321 NA other upstream 146359 15133132 ~ 15133588 (+)
G1709840 NA other upstream 597739 14679482 ~ 14682208 (+)
G1709824 NA other upstream 622663 14655687 ~ 14657284 (+)
G1709592 NA other upstream 1213264 14065849 ~ 14066683 (+)
G1710901 mest other downstream 647858 15931098 ~ 15936421 (+)
LOC110499847 LOC106609634 other downstream 1242337 16318043 ~ 16528816 (+)
G1711795 NA other downstream 1436680 16719920 ~ 16720552 (+)

Expression


Co-expression Network