G1710735


Basic Information

Item Value
gene id G1710735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 15463949 ~ 15464148 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1959856
tgacccggattactggttgctgcggaaaaggaggaaggtcaaaaggggggtgagtgtaacggatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagagccgcggcttttgtggagcgatgggtaacgatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1959856 True 200 lncRNA 0.52 1 15463949 15464148

Neighbor

gene id symbol gene type direction distance location
LOC118942891 NA coding upstream 115241 15347098 ~ 15356958 (+)
LOC110490612 ube2h coding upstream 832664 14600080 ~ 14631285 (+)
LOC110519829 zc3hc1 coding upstream 866961 14587560 ~ 14596988 (+)
LOC110490791 LOC106609779 coding upstream 898745 14549517 ~ 14565204 (+)
LOC118942889 LOC106609776 coding upstream 915094 14533785 ~ 14548855 (+)
LOC110500994 LOC106609603 coding downstream 236471 15700619 ~ 15737550 (+)
col7a1l LOC106576558 coding downstream 315427 15779575 ~ 15866718 (+)
LOC110490786 LOC106576567 coding downstream 406042 15870190 ~ 15889111 (+)
LOC110518420 LOC106593864 coding downstream 438783 15902931 ~ 15905674 (+)
copg2 copg2 coding downstream 444296 15908444 ~ 15923791 (+)
G1710732 NA non-coding upstream 1819 15461883 ~ 15462130 (+)
G1710619 NA non-coding upstream 127080 15336624 ~ 15336869 (+)
G1710606 NA non-coding upstream 149715 15313831 ~ 15314234 (+)
G1710603 NA non-coding upstream 151655 15312084 ~ 15312294 (+)
G1710736 NA non-coding downstream 1075 15465223 ~ 15465758 (+)
G1710784 NA non-coding downstream 151472 15615620 ~ 15617131 (+)
G1710792 NA non-coding downstream 186207 15650355 ~ 15651386 (+)
G1710809 NA non-coding downstream 219587 15683735 ~ 15738481 (+)
G1710810 NA non-coding downstream 220225 15684373 ~ 15684954 (+)
G1710321 NA other upstream 330361 15133132 ~ 15133588 (+)
G1709840 NA other upstream 781741 14679482 ~ 14682208 (+)
G1709824 NA other upstream 806665 14655687 ~ 14657284 (+)
G1709592 NA other upstream 1397266 14065849 ~ 14066683 (+)
LOC110499821 LOC106609608 other downstream 15000 15462544 ~ 15700037 (+)
G1710901 mest other downstream 466950 15931098 ~ 15936421 (+)
LOC110499847 LOC106609634 other downstream 1061429 16318043 ~ 16528816 (+)
G1711795 NA other downstream 1255772 16719920 ~ 16720552 (+)

Expression


Co-expression Network