G1710907


Basic Information

Item Value
gene id G1710907
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 15946357 ~ 15946644 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1960075
GTATATTTAAATGCAAATCTGCATTTTAGATGTAAACATGTTATAGGTcccaataactttttttttttgcaatttcaCTTCAATTTGAGAAACATATCCCACCAGCGATAAACCTCATTCAGATGCAGGCGCACAGATAAAACATGAAGGATCCGAAACGGCAAAACTCTGTGATCCACGTCTTACACATGACACGAGTGTGTCATTTCAAACTTCATCAGCAACCTTCTATTCCAGTTTGTTGGATTTGAGCAATAGTTTTCCATGTGCGCGTGCACAGGCTATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1960075 True 288 lncRNA 0.38 1 15946357 15946644

Neighbor

gene id symbol gene type direction distance location
copg2 copg2 coding upstream 22566 15908444 ~ 15923791 (+)
LOC110518420 LOC106593864 coding upstream 40683 15902931 ~ 15905674 (+)
LOC110490786 LOC106576567 coding upstream 57246 15870190 ~ 15889111 (+)
col7a1l LOC106576558 coding upstream 79639 15779575 ~ 15866718 (+)
LOC110500994 LOC106609603 coding upstream 208807 15700619 ~ 15737550 (+)
LOC110499838 LOC106609638 coding downstream 344829 16291473 ~ 16298592 (+)
LOC110499847 LOC106609634 coding downstream 371399 16318043 ~ 16528816 (+)
LOC110499856 LOC106609654 coding downstream 647783 16594427 ~ 16600458 (+)
LOC110499844 LOC106609653 coding downstream 657615 16604259 ~ 16608641 (+)
LOC110499863 tap26 coding downstream 793725 16740369 ~ 16742407 (+)
G1710901 mest non-coding upstream 13640 15931098 ~ 15936421 (+)
G1710896 NA non-coding upstream 32650 15912907 ~ 15913707 (+)
G1710890 NA non-coding upstream 56201 15889829 ~ 15890156 (+)
G1710880 NA non-coding upstream 77037 15867646 ~ 15869320 (+)
G1710813 NA non-coding upstream 251622 15692882 ~ 15694735 (+)
G1710912 LOC105893511 non-coding downstream 12899 15959543 ~ 15960536 (+)
G1710915 LOC106576479 non-coding downstream 16769 15963413 ~ 15966257 (+)
G1710918 NA non-coding downstream 20906 15967550 ~ 15967792 (+)
G1710919 NA non-coding downstream 21302 15967946 ~ 15968237 (+)
G1710940 NA non-coding downstream 67791 16014435 ~ 16014637 (+)
LOC110499821 LOC106609608 other upstream 455486 15462544 ~ 15700037 (+)
G1710321 NA other upstream 812769 15133132 ~ 15133588 (+)
G1709840 NA other upstream 1264149 14679482 ~ 14682208 (+)
G1711795 NA other downstream 773276 16719920 ~ 16720552 (+)
LOC110501009 LOC105020375 other downstream 967576 16914013 ~ 16973778 (+)
G1712658 NA other downstream 1719636 17666280 ~ 17668586 (+)

Expression


Co-expression Network