G1710949


Basic Information

Item Value
gene id G1710949
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16058766 ~ 16059071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1960131
cttccatcctcctctgggtacattgacttcatggttctcacccctctCCCATCGACATACACAGTAATTATAACAAcatccggaggacgtcctccaacctatcagagatcTTGcatatgaactgacatgttgtccacccaatcaaagaatcagagaattaatctagtactgaaagcataagctacatcTAGCAAGCCCTGCAGTGCacaaaatgtggtgagtagttgactcaaagagagacaaagacagtttgacagttttgaacaaattcatttctacaaaaataaagaagcaagagacagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1960131 True 306 lncRNA 0.41 1 16058766 16059071

Neighbor

gene id symbol gene type direction distance location
copg2 copg2 coding upstream 134975 15908444 ~ 15923791 (+)
LOC110518420 LOC106593864 coding upstream 153092 15902931 ~ 15905674 (+)
LOC110490786 LOC106576567 coding upstream 169655 15870190 ~ 15889111 (+)
col7a1l LOC106576558 coding upstream 192048 15779575 ~ 15866718 (+)
LOC110500994 LOC106609603 coding upstream 321216 15700619 ~ 15737550 (+)
LOC110499838 LOC106609638 coding downstream 232402 16291473 ~ 16298592 (+)
LOC110499847 LOC106609634 coding downstream 258972 16318043 ~ 16528816 (+)
LOC110499856 LOC106609654 coding downstream 535356 16594427 ~ 16600458 (+)
LOC110499844 LOC106609653 coding downstream 545188 16604259 ~ 16608641 (+)
LOC110499863 tap26 coding downstream 681298 16740369 ~ 16742407 (+)
G1710948 NA non-coding upstream 24589 16033778 ~ 16034177 (+)
G1710946 NA non-coding upstream 28666 16029774 ~ 16030100 (+)
G1710943 NA non-coding upstream 37442 16020302 ~ 16021324 (+)
G1710940 NA non-coding upstream 44129 16014435 ~ 16014637 (+)
G1710919 NA non-coding upstream 90529 15967946 ~ 15968237 (+)
G1710996 NA non-coding downstream 136841 16195912 ~ 16196211 (+)
G1711004 NA non-coding downstream 151331 16210402 ~ 16211002 (+)
G1711006 NA non-coding downstream 157581 16216652 ~ 16217403 (+)
G1711008 NA non-coding downstream 158925 16217996 ~ 16219310 (+)
G1711046 NA non-coding downstream 240070 16299141 ~ 16299885 (+)
G1710901 mest other upstream 122345 15931098 ~ 15936421 (+)
LOC110499821 LOC106609608 other upstream 567895 15462544 ~ 15700037 (+)
G1710321 NA other upstream 925178 15133132 ~ 15133588 (+)
G1709840 NA other upstream 1376558 14679482 ~ 14682208 (+)
G1711795 NA other downstream 660849 16719920 ~ 16720552 (+)
LOC110501009 LOC105020375 other downstream 855149 16914013 ~ 16973778 (+)
G1712658 NA other downstream 1607209 17666280 ~ 17668586 (+)

Expression


Co-expression Network