G1711004


Basic Information

Item Value
gene id G1711004
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16210402 ~ 16211002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1960193
CTACTGAGGTACAACCCAAGTCTCCCCAGCCATCCCTCTGGAGAAgaggattgagatgcagcccaatAGGTTTCTCTaagctgattaaagagaatgatcattacacaggtgctggggacaataaaaggtcactctaaaatgagcagttttgtcacacagcacaatgtcacagatgtctcaagtttagaggaagcttgcaattggcatgctgactgcaggaatgtccaacagagctgttgccagataattttatgttaatttctctaccataagccgcctccaacgtcattttagagaatttggcagtacgtccaaccggc

Function

NR:

description
hypothetical protein EH28_06569

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1960193 True 320 lncRNA 0.45 2 16210402 16211002

Neighbor

gene id symbol gene type direction distance location
copg2 copg2 coding upstream 286611 15908444 ~ 15923791 (+)
LOC110518420 LOC106593864 coding upstream 304728 15902931 ~ 15905674 (+)
LOC110490786 LOC106576567 coding upstream 321291 15870190 ~ 15889111 (+)
col7a1l LOC106576558 coding upstream 343684 15779575 ~ 15866718 (+)
LOC110500994 LOC106609603 coding upstream 472852 15700619 ~ 15737550 (+)
LOC110499838 LOC106609638 coding downstream 80471 16291473 ~ 16298592 (+)
LOC110499847 LOC106609634 coding downstream 107041 16318043 ~ 16528816 (+)
LOC110499856 LOC106609654 coding downstream 383425 16594427 ~ 16600458 (+)
LOC110499844 LOC106609653 coding downstream 393257 16604259 ~ 16608641 (+)
LOC110499863 tap26 coding downstream 529367 16740369 ~ 16742407 (+)
G1710996 NA non-coding upstream 14191 16195912 ~ 16196211 (+)
G1710949 NA non-coding upstream 151331 16058766 ~ 16059071 (+)
G1710948 NA non-coding upstream 176225 16033778 ~ 16034177 (+)
G1710946 NA non-coding upstream 180302 16029774 ~ 16030100 (+)
G1710943 NA non-coding upstream 189078 16020302 ~ 16021324 (+)
G1711006 NA non-coding downstream 5650 16216652 ~ 16217403 (+)
G1711008 NA non-coding downstream 6994 16217996 ~ 16219310 (+)
G1711046 NA non-coding downstream 88139 16299141 ~ 16299885 (+)
G1711051 NA non-coding downstream 96421 16307423 ~ 16307659 (+)
G1711052 NA non-coding downstream 96784 16307786 ~ 16308107 (+)
G1710901 mest other upstream 273981 15931098 ~ 15936421 (+)
LOC110499821 LOC106609608 other upstream 719531 15462544 ~ 15700037 (+)
G1710321 NA other upstream 1076814 15133132 ~ 15133588 (+)
G1709840 NA other upstream 1528194 14679482 ~ 14682208 (+)
G1711795 NA other downstream 508918 16719920 ~ 16720552 (+)
LOC110501009 LOC105020375 other downstream 703218 16914013 ~ 16973778 (+)
G1712658 NA other downstream 1455278 17666280 ~ 17668586 (+)

Expression


Co-expression Network