G1711051


Basic Information

Item Value
gene id G1711051
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16307423 ~ 16307659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1960264
cacacacacacacacacacacactcacttctcACTGGCCTCTGGGCGTTGACGGAGAGTTTGGCCAAGTCTCAACGtcagcagtgaagaggcgactctgggatgctggccttctaggcagagttcctctgtccagtgtctgtgttcttttgcccatcttaatcttttcattttattggccagtctgagatacagatttttctttgcaactctgcctagaaggccagcatcccagagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1960264 True 237 lncRNA 0.50 1 16307423 16307659

Neighbor

gene id symbol gene type direction distance location
LOC110499838 LOC106609638 coding upstream 8831 16291473 ~ 16298592 (+)
copg2 copg2 coding upstream 383632 15908444 ~ 15923791 (+)
LOC110518420 LOC106593864 coding upstream 401749 15902931 ~ 15905674 (+)
LOC110490786 LOC106576567 coding upstream 418312 15870190 ~ 15889111 (+)
col7a1l LOC106576558 coding upstream 440705 15779575 ~ 15866718 (+)
LOC110499847 LOC106609634 coding downstream 10384 16318043 ~ 16528816 (+)
LOC110499856 LOC106609654 coding downstream 286768 16594427 ~ 16600458 (+)
LOC110499844 LOC106609653 coding downstream 296600 16604259 ~ 16608641 (+)
LOC110499863 tap26 coding downstream 432710 16740369 ~ 16742407 (+)
LOC110499861 LOC106609625 coding downstream 435136 16742795 ~ 16758777 (+)
G1711046 NA non-coding upstream 7538 16299141 ~ 16299885 (+)
G1711008 NA non-coding upstream 88113 16217996 ~ 16219310 (+)
G1711006 NA non-coding upstream 90020 16216652 ~ 16217403 (+)
G1711004 NA non-coding upstream 96421 16210402 ~ 16211002 (+)
G1710996 NA non-coding upstream 111212 16195912 ~ 16196211 (+)
G1711052 NA non-coding downstream 127 16307786 ~ 16308107 (+)
G1711055 NA non-coding downstream 5265 16312924 ~ 16313184 (+)
G1711115 NA non-coding downstream 135938 16443597 ~ 16443813 (+)
G1711121 NA non-coding downstream 157866 16465525 ~ 16465917 (+)
G1711122 NA non-coding downstream 159356 16467015 ~ 16467777 (+)
G1710901 mest other upstream 371002 15931098 ~ 15936421 (+)
LOC110500994 LOC106609603 other upstream 569946 15700619 ~ 15737550 (+)
LOC110499821 LOC106609608 other upstream 816552 15462544 ~ 15700037 (+)
G1710321 NA other upstream 1173835 15133132 ~ 15133588 (+)
G1709840 NA other upstream 1625215 14679482 ~ 14682208 (+)
G1711795 NA other downstream 412261 16719920 ~ 16720552 (+)
LOC110501009 LOC105020375 other downstream 606561 16914013 ~ 16973778 (+)
G1712658 NA other downstream 1358621 17666280 ~ 17668586 (+)

Expression


Co-expression Network