Gene
RNA
| Item | Value |
|---|---|
| gene id | G1711055 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 16312924 ~ 16313184 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1960268 | True | 261 | lncRNA | 0.36 | 1 | 16312924 | 16313184 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499838 | LOC106609638 | coding | upstream | 14332 | 16291473 ~ 16298592 (+) |
| copg2 | copg2 | coding | upstream | 389133 | 15908444 ~ 15923791 (+) |
| LOC110518420 | LOC106593864 | coding | upstream | 407250 | 15902931 ~ 15905674 (+) |
| LOC110490786 | LOC106576567 | coding | upstream | 423813 | 15870190 ~ 15889111 (+) |
| col7a1l | LOC106576558 | coding | upstream | 446206 | 15779575 ~ 15866718 (+) |
| LOC110499847 | LOC106609634 | coding | downstream | 4859 | 16318043 ~ 16528816 (+) |
| LOC110499856 | LOC106609654 | coding | downstream | 281243 | 16594427 ~ 16600458 (+) |
| LOC110499844 | LOC106609653 | coding | downstream | 291075 | 16604259 ~ 16608641 (+) |
| LOC110499863 | tap26 | coding | downstream | 427185 | 16740369 ~ 16742407 (+) |
| LOC110499861 | LOC106609625 | coding | downstream | 429611 | 16742795 ~ 16758777 (+) |
| G1711052 | NA | non-coding | upstream | 4817 | 16307786 ~ 16308107 (+) |
| G1711051 | NA | non-coding | upstream | 5265 | 16307423 ~ 16307659 (+) |
| G1711046 | NA | non-coding | upstream | 13039 | 16299141 ~ 16299885 (+) |
| G1711008 | NA | non-coding | upstream | 93614 | 16217996 ~ 16219310 (+) |
| G1711006 | NA | non-coding | upstream | 95521 | 16216652 ~ 16217403 (+) |
| G1711115 | NA | non-coding | downstream | 130413 | 16443597 ~ 16443813 (+) |
| G1711121 | NA | non-coding | downstream | 152341 | 16465525 ~ 16465917 (+) |
| G1711122 | NA | non-coding | downstream | 153831 | 16467015 ~ 16467777 (+) |
| G1711126 | NA | non-coding | downstream | 159877 | 16473061 ~ 16473403 (+) |
| G1711129 | NA | non-coding | downstream | 166361 | 16479545 ~ 16479795 (+) |
| G1710901 | mest | other | upstream | 376503 | 15931098 ~ 15936421 (+) |
| LOC110500994 | LOC106609603 | other | upstream | 575447 | 15700619 ~ 15737550 (+) |
| LOC110499821 | LOC106609608 | other | upstream | 822053 | 15462544 ~ 15700037 (+) |
| G1710321 | NA | other | upstream | 1179336 | 15133132 ~ 15133588 (+) |
| G1709840 | NA | other | upstream | 1630716 | 14679482 ~ 14682208 (+) |
| G1711795 | NA | other | downstream | 406736 | 16719920 ~ 16720552 (+) |
| LOC110501009 | LOC105020375 | other | downstream | 601036 | 16914013 ~ 16973778 (+) |
| G1712658 | NA | other | downstream | 1353096 | 17666280 ~ 17668586 (+) |
