G1711115


Basic Information

Item Value
gene id G1711115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16443597 ~ 16443813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1960333
caataccccataatgacaaagcaaaaatagtttttttgacattcagaccctttgctatgagactcgaaattgagctcagttgcatcctgtttccatagatcatccttgagatgtttctacaacttgattggagtctgctgtaaattctattgattggacatgatttggaaaggcacacacctgtctatataaggtcccacagttgacagtgcatgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1960333 True 217 lncRNA 0.39 1 16443597 16443813

Neighbor

gene id symbol gene type direction distance location
LOC110499838 LOC106609638 coding upstream 145005 16291473 ~ 16298592 (+)
copg2 copg2 coding upstream 519806 15908444 ~ 15923791 (+)
LOC110518420 LOC106593864 coding upstream 537923 15902931 ~ 15905674 (+)
LOC110490786 LOC106576567 coding upstream 554486 15870190 ~ 15889111 (+)
col7a1l LOC106576558 coding upstream 576879 15779575 ~ 15866718 (+)
LOC110499856 LOC106609654 coding downstream 150614 16594427 ~ 16600458 (+)
LOC110499844 LOC106609653 coding downstream 160446 16604259 ~ 16608641 (+)
LOC110499863 tap26 coding downstream 296556 16740369 ~ 16742407 (+)
LOC110499861 LOC106609625 coding downstream 298982 16742795 ~ 16758777 (+)
LOC110501007 LOC106576552 coding downstream 318584 16762397 ~ 16825929 (+)
G1711055 NA non-coding upstream 130413 16312924 ~ 16313184 (+)
G1711052 NA non-coding upstream 135490 16307786 ~ 16308107 (+)
G1711051 NA non-coding upstream 135938 16307423 ~ 16307659 (+)
G1711046 NA non-coding upstream 143712 16299141 ~ 16299885 (+)
G1711008 NA non-coding upstream 224287 16217996 ~ 16219310 (+)
G1711121 NA non-coding downstream 21712 16465525 ~ 16465917 (+)
G1711122 NA non-coding downstream 23202 16467015 ~ 16467777 (+)
G1711126 NA non-coding downstream 29248 16473061 ~ 16473403 (+)
G1711129 NA non-coding downstream 35732 16479545 ~ 16479795 (+)
G1711136 NA non-coding downstream 55378 16499191 ~ 16499452 (+)
G1710901 mest other upstream 507176 15931098 ~ 15936421 (+)
LOC110500994 LOC106609603 other upstream 706120 15700619 ~ 15737550 (+)
LOC110499821 LOC106609608 other upstream 952726 15462544 ~ 15700037 (+)
G1710321 NA other upstream 1310009 15133132 ~ 15133588 (+)
G1709840 NA other upstream 1761389 14679482 ~ 14682208 (+)
LOC110499847 LOC106609634 other downstream 81764 16318043 ~ 16528816 (+)
G1711795 NA other downstream 276107 16719920 ~ 16720552 (+)
LOC110501009 LOC105020375 other downstream 470407 16914013 ~ 16973778 (+)
G1712658 NA other downstream 1222467 17666280 ~ 17668586 (+)

Expression


Co-expression Network