Gene
RNA
| Item | Value |
|---|---|
| gene id | G1711122 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 16467015 ~ 16467777 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1960341 | True | 709 | lncRNA | 0.39 | 2 | 16467015 | 16467777 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499838 | LOC106609638 | coding | upstream | 168423 | 16291473 ~ 16298592 (+) |
| copg2 | copg2 | coding | upstream | 543224 | 15908444 ~ 15923791 (+) |
| LOC110518420 | LOC106593864 | coding | upstream | 561341 | 15902931 ~ 15905674 (+) |
| LOC110490786 | LOC106576567 | coding | upstream | 577904 | 15870190 ~ 15889111 (+) |
| col7a1l | LOC106576558 | coding | upstream | 600297 | 15779575 ~ 15866718 (+) |
| LOC110499856 | LOC106609654 | coding | downstream | 126650 | 16594427 ~ 16600458 (+) |
| LOC110499844 | LOC106609653 | coding | downstream | 136482 | 16604259 ~ 16608641 (+) |
| LOC110499863 | tap26 | coding | downstream | 272592 | 16740369 ~ 16742407 (+) |
| LOC110499861 | LOC106609625 | coding | downstream | 275018 | 16742795 ~ 16758777 (+) |
| LOC110501007 | LOC106576552 | coding | downstream | 294620 | 16762397 ~ 16825929 (+) |
| G1711121 | NA | non-coding | upstream | 1098 | 16465525 ~ 16465917 (+) |
| G1711115 | NA | non-coding | upstream | 23202 | 16443597 ~ 16443813 (+) |
| G1711055 | NA | non-coding | upstream | 153831 | 16312924 ~ 16313184 (+) |
| G1711052 | NA | non-coding | upstream | 158908 | 16307786 ~ 16308107 (+) |
| G1711051 | NA | non-coding | upstream | 159356 | 16307423 ~ 16307659 (+) |
| G1711126 | NA | non-coding | downstream | 5284 | 16473061 ~ 16473403 (+) |
| G1711129 | NA | non-coding | downstream | 11768 | 16479545 ~ 16479795 (+) |
| G1711136 | NA | non-coding | downstream | 31414 | 16499191 ~ 16499452 (+) |
| G1711137 | NA | non-coding | downstream | 32579 | 16500356 ~ 16500582 (+) |
| G1711152 | NA | non-coding | downstream | 55843 | 16523620 ~ 16524534 (+) |
| G1710901 | mest | other | upstream | 530594 | 15931098 ~ 15936421 (+) |
| LOC110500994 | LOC106609603 | other | upstream | 729538 | 15700619 ~ 15737550 (+) |
| LOC110499821 | LOC106609608 | other | upstream | 976144 | 15462544 ~ 15700037 (+) |
| G1710321 | NA | other | upstream | 1333427 | 15133132 ~ 15133588 (+) |
| G1709840 | NA | other | upstream | 1784807 | 14679482 ~ 14682208 (+) |
| LOC110499847 | LOC106609634 | other | downstream | 57800 | 16318043 ~ 16528816 (+) |
| G1711795 | NA | other | downstream | 252143 | 16719920 ~ 16720552 (+) |
| LOC110501009 | LOC105020375 | other | downstream | 446443 | 16914013 ~ 16973778 (+) |
| G1712658 | NA | other | downstream | 1198503 | 17666280 ~ 17668586 (+) |
